RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 G3V318 75 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 M0QZK8 103 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 ARPC5O15511 151 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 CAV2P51636 162 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 VAMP2P63027 116 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 SMIM8Q96KF7 97 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 ENY2Q9NPA8 101 aa12.33□□□□□ -0.44
SFSWAP-206ENST00000537582 C15orf62A8K5M9 175 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 E5RGE8 158 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 IGHG2P01859 326 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 RLN2P04090 185 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 PET100P0DJ07 73 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 UBA52P62987 128 aaKnown RBP12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 ECSCRQ19T08 205 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 SLC35E3Q7Z769 313 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 TNFSF18Q9UNG2 199 aa12.32□□□□□ -0.44
SFSWAP-206ENST00000537582 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 CLDN34H7C241 214 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 PRH1P02810 166 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 MFAP2P55001 183 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 ZNF546Q86UE3 836 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 P2RX4Q99571 388 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 HIPK2Q9H2X6 1198 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 ZFP57Q9NU63 452 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 DMRT1Q9Y5R6 373 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 NF1P21359 2839 aa12.31□□□□□ -0.44
SFSWAP-206ENST00000537582 A0A1W2PN81 502 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 CST7O76096 145 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 IFNA10P01566 189 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 HKR1P10072 659 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 RNASE2P10153 161 aaKnown RBP12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 S100A11P31949 105 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 CHRNA7P36544 502 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 P2RY1P47900 373 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 SLC24A4Q8NFF2 622 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 SGMS2Q8NHU3 365 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 NPFFR1Q9GZQ6 430 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 INS-IGF2F8WCM5 200 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 TAS2R30P59541 319 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 DEFA5Q01523 94 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 NHLH2Q02577 135 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 BSXQ3C1V8 233 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 UNQ5815/PRO19632Q6UWF5 114 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 TMEM252Q8N6L7 170 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 CIB3Q96Q77 187 aaPredicted RBP12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
SFSWAP-206ENST00000537582 SOX15O60248 233 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 CTRB1P17538 263 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 NPY1RP25929 384 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 ERHP84090 104 aaKnown RBP12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 EWSR1Q01844 656 aaKnown RBP eCLIP12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 TMEM14EPQ6UXP3 125 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 TMUB2Q71RG4 321 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 PRSS22Q9GZN4 317 aa12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
SFSWAP-206ENST00000537582 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 FBXO24O75426 580 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 IGF1P05019 195 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 SNCAP37840 140 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 RAB14P61106 215 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 C10orf99Q6UWK7 81 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 Q6ZSV7 163 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 TMEM217Q8N7C4 229 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
SFSWAP-206ENST00000537582 TCF21O43680 179 aa12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 AQP10Q96PS8 301 aa12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 SRSF8Q9BRL6 282 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 SMIM3Q9BZL3 60 aa12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 WNT10AQ9GZT5 417 aa12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 F11RQ9Y624 299 aaKnown RBP12.27□□□□□ -0.44
SFSWAP-206ENST00000537582 IGHV3-21A0A0B4J1V1 117 aa12.26□□□□□ -0.45
SFSWAP-206ENST00000537582 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
SFSWAP-206ENST00000537582 AP4M1O00189 453 aa12.26□□□□□ -0.45
SFSWAP-206ENST00000537582 IGHV3-48P01763 117 aa12.26□□□□□ -0.45
SFSWAP-206ENST00000537582 CRYGCP07315 174 aa12.26□□□□□ -0.45
SFSWAP-206ENST00000537582 CRIP2P52943 208 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms