RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 LAMTOR1Q6IAA8 161 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 SPSB3Q6PJ21 355 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 Q6ZWC4 215 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 LYG2Q86SG7 212 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 LYSMD2Q8IV50 215 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 CADM3Q8N126 398 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 UBAC2Q8NBM4 344 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 OR5H2Q8NGV7 314 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 BORCS5Q969J3 196 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 C20orf24Q9BUV8 137 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 FXYD6Q9H0Q3 95 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 DAZ1Q9NQZ3 744 aaKnown RBP6.26□□□□□ -1.41
USP28-203ENST00000537490 SMPXQ9UHP9 88 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 TP53TG1Q9Y2A0 90 aa6.26□□□□□ -1.41
USP28-203ENST00000537490 LYSTQ99698 3801 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 KIR2DL5BA0A0G2JN68 375 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 KIR2DL5BA0A0G2JPC4 375 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 GPR31O00270 319 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 UBE2CO00762 179 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 LY6G6CO95867 125 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 HLA-DMAP28067 261 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 PRSS3P35030 304 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 LSM3P62310 102 aaKnown RBP6.25□□□□□ -1.41
USP28-203ENST00000537490 ZNF124Q15973 351 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 KCTD21Q4G0X4 260 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 PHLDA2Q53GA4 152 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 Q56UQ5 140 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 TMEM69Q5SWH9 247 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
USP28-203ENST00000537490 CROCCP3Q8IVE0 287 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 CMTM1Q8IZ96 169 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 KIR2DL5AQ8N109 375 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 SAMD12Q8N8I0 201 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 TSPAN14Q8NG11 270 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 OR6F1Q8NGZ6 308 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 OR5B3Q8NH48 314 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 KIR2DL5BQ8NHK3 375 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 RNF183Q96D59 192 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 YIPF6Q96EC8 236 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 ATP6V0BQ99437 205 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 RNF2Q99496 336 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 PRNDQ9UKY0 176 aa6.25□□□□□ -1.41
USP28-203ENST00000537490 IGHV3-49A0A0A0MS15 119 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 OR4C46A6NHA9 309 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 C15orf62A8K5M9 175 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 I3L2K1 104 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 CHEK1O14757 476 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 IGKV1-39P01597 117 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 IGHV3-48P01763 117 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 IGKV1D-39P04432 117 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
USP28-203ENST00000537490 HRH1P35367 487 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 TAS2R46P59540 309 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 APRG1Q8IVJ8 170 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 STPG3Q8N7X2 389 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 OR1P1Q8NH06 330 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 GPX8Q8TED1 209 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 SLC25A46Q96AG3 418 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 MISP3Q96FF7 219 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 TMEM56Q96MV1 263 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 RHPN1-AS1Q9BWJ2 59 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 MAP6D1Q9H9H5 199 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 TMEM14BQ9NUH8 114 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 FKBP11Q9NYL4 201 aa6.24□□□□□ -1.41
USP28-203ENST00000537490 PLECQ15149 4684 aaKnown RBP6.24□□□□□ -1.41
USP28-203ENST00000537490 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 IGHV3OR16-13A0A075B7E8 117 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 IGHV3-74A0A0B4J1X5 117 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 IGHV7-4-1A0A0J9YVY3 117 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 NUPR2A6NF83 97 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 YIF1AO95070 293 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 MT-CO2P00403 227 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 EIF4EP06730 217 aaKnown RBP6.23□□□□□ -1.41
USP28-203ENST00000537490 TFPI2P48307 235 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 MFAP4P55083 255 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 TSPAN5P62079 268 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 LINC01559Q495D7 138 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 FAM90A2PQ658T7 463 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 TBC1D26Q86UD7 250 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 TMEM116Q8NCL8 245 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 GALNT14Q96FL9 552 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 OR10C1Q96KK4 312 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 TSC22D3Q99576 134 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
USP28-203ENST00000537490 ALMS1Q8TCU4 4167 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 TRAV14DV4A0A0A6YYC5 116 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 NUPL2O15504 423 aaKnown RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 UCP3P55916 312 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 HSPE1P61604 102 aaKnown RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 RELQ04864 619 aaPredicted RBP6.22□□□□□ -1.41
USP28-203ENST00000537490 IZUMO4Q1ZYL8 232 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 SPINK9Q5DT21 86 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 LPCAT3Q6P1A2 487 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 H2BFWTQ7Z2G1 175 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 SNX29P2Q8IUI4 249 aa6.22□□□□□ -1.41
USP28-203ENST00000537490 LILRB2Q8N423 598 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms