RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 IL36BQ9NZH7 164 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 IGKV1OR2-108A0A075B7D4 117 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 K7EN84 100 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 ACTL6BO94805 426 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 CCL8P80075 99 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF90Q03938 601 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 PSG5Q15238 335 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 PQLC2Q6ZP29 291 aa13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 SNRNP40Q96DI7 357 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 EAF1Q96JC9 268 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 NOL4LQ96MY1 436 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-202ENST00000535997 HELTA6NFD8 242 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 NKX6-3A6NJ46 265 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 HNF1AP20823 631 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 CACNG8Q8WXS5 425 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 DCAF16Q9NXF7 216 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF705GA8MUZ8 300 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 A8MWP6 167 aa13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 SAA1P0DJI8 122 aaPredicted RBP13.06□□□□□ -0.32
CHMP1A-202ENST00000535997 CEP250Q9BV73 2442 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 C17orf100A8MU93 164 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 APOA2P02652 100 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 RNASE2P10153 161 aaKnown RBP13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 OR10J1P30954 320 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 TAS2R45P59539 299 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 HLA-DRB5Q30154 266 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 OR5AN1Q8NGI8 311 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 COMMD5Q9GZQ3 224 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 NDUFA4L2Q9NRX3 87 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 INS-IGF2F8WCM5 200 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 K7EM74 188 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 OR5G3P0C626 314 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 SELENOTP62341 195 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 CD69Q07108 199 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 RND1Q92730 232 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 MGAQ8IWI9 3026 aa13.05□□□□□ -0.32
CHMP1A-202ENST00000535997 GNG4P50150 75 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ERHP84090 104 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ADIPOQQ15848 244 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 TMEM177Q53S58 311 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 SLC17A3O00476 420 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 OR10J4P0C629 311 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 COL8A2P25067 703 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 CRYBB3P26998 211 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ADMP35318 185 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ERVFC1-1P60608 527 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 RPL8P62917 257 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 TMEM256Q8N2U0 113 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 FLYWCH2Q96CP2 140 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 HARBI1Q96MB7 349 aa13.04□□□□□ -0.32
CHMP1A-202ENST00000535997 H0YJW9 148 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 LGALS4P56470 323 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 SSX2Q16385 188 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 MLANAQ16655 118 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 TMEM200BQ69YZ2 307 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 OR10W1Q8NGF6 305 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 SLC25A33Q9BSK2 321 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 MRPL20Q9BYC9 149 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 CUL9Q8IWT3 2517 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF318Q5VUA4 2279 aa13.03□□□□□ -0.32
CHMP1A-202ENST00000535997 A0A1W2PRE2 83 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 OR7C2O60412 319 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 USF1P22415 310 aaPredicted RBP13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 GATA2P23769 480 aaPredicted RBP13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 RPEL1Q2QD12 228 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 MMD2Q8IY49 270 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 OR9G1Q8NH87 305 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 V9GYV3 84 aa13.02□□□□□ -0.32
CHMP1A-202ENST00000535997 DPRXA6NFQ7 191 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 DLL1O00548 723 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 C8orf88P0DMB2 117 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 RPL19P84098 196 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 UNQ6494/PRO21346Q6UXR6 183 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 DOLPP1Q86YN1 238 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 OR4C13Q8NGP0 309 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 RNF2Q99496 336 aa13.02□□□□□ -0.33
CHMP1A-202ENST00000535997 PPIAL4EA0A075B759 164 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 TRBV9A0A0B4J1U6 114 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 A0A0G2JNJ9 132 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 A0A1W2PN81 502 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 PPIAL4DF5H284 164 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 PRRG2O14669 202 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 PPIAL4FP0DN26 164 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 FAM71F2Q6NXP2 309 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 SSX8Q7RTT4 187 aa13.01□□□□□ -0.33
CHMP1A-202ENST00000535997 C8orf31Q8N9H6 132 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms