RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 TEX38Q6PEX7 206 aa12.76□□□□□ -0.37
VAMP1-205ENST00000535927 CENPVQ7Z7K6 275 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-205ENST00000535927 LINC01006Q8NI28 216 aa12.76□□□□□ -0.37
VAMP1-205ENST00000535927 PPP1R1CQ8WVI7 109 aa12.76□□□□□ -0.37
VAMP1-205ENST00000535927 A0A1B0GW64 132 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 LINC01548A6NM66 108 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 L7N2F9 121 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 DEDDO75618 318 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 MPC2O95563 127 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 IGLV1-40P01703 118 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 OPN1MWP04001 364 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 OPN1MW2P0DN77 364 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 OPN1MW3P0DN78 364 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 RAB11AP62491 216 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 VAMP2P63027 116 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 CFHR3Q02985 330 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 FOXE3Q13461 319 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 PVRIGQ6DKI7 326 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 Q6ZS46 218 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 RNF152Q8N8N0 203 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
VAMP1-205ENST00000535927 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
VAMP1-205ENST00000535927 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 PSMB11A5LHX3 300 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 SH2D7A6NKC9 451 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 FBXO24O75426 580 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 SCGB1D2O95969 90 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 DEFA4P12838 97 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 RAB32Q13637 225 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 PRSS54Q6PEW0 395 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 OR10W1Q8NGF6 305 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 ATP6V0BQ99437 205 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
VAMP1-205ENST00000535927 FBXO7Q9Y3I1 522 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 RNF114Q9Y508 228 aa12.74□□□□□ -0.37
VAMP1-205ENST00000535927 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 CCNKO75909 580 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 IFNA10P01566 189 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 LYL1P12980 280 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 MYOD1P15172 320 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 P2RY1P47900 373 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 EXOSC2Q13868 293 aaKnown RBP12.73□□□□□ -0.37
VAMP1-205ENST00000535927 ECSCRQ19T08 205 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 TMEM65Q6PI78 240 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 NECAP1Q8NC96 275 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 PSENENQ9NZ42 101 aa12.73□□□□□ -0.37
VAMP1-205ENST00000535927 LSM5Q9Y4Y9 91 aaKnown RBP12.73□□□□□ -0.37
VAMP1-205ENST00000535927 TRBV9A0A0B4J1U6 114 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 G3V318 75 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 SLC25A4P12235 298 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 AREGP15514 252 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 NPY1RP25929 384 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 S100A10P60903 97 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 C11orf87Q6NUJ2 197 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 OR4X2Q8NGF9 303 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 WIPF2Q8TF74 440 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-205ENST00000535927 CACNG8Q8WXS5 425 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 P2RX4Q99571 388 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 C11orf1Q9H5F2 150 aa12.72□□□□□ -0.37
VAMP1-205ENST00000535927 RPS10-NUDT3A0A1W2PQS6 291 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 SSSCA1O60232 199 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 PSMB8P28062 276 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 PROK1P58294 105 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 CD83Q01151 205 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 KLHDC1Q8N7A1 406 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 OR5T1Q8NG75 326 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 CXorf58Q96LI9 332 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 NOL4LQ96MY1 436 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 RNF126Q9BV68 326 aa12.71□□□□□ -0.37
VAMP1-205ENST00000535927 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.37
VAMP1-205ENST00000535927 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 PAX9P55771 341 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 BAXQ07812 192 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 SLC25A24Q6NUK1 477 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 TMEM14EPQ6UXP3 125 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 OR5AU1Q8NGC0 362 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 GGACTQ9BVM4 153 aa12.7□□□□□ -0.38
VAMP1-205ENST00000535927 ZNF355PQ9NSJ1 428 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms