RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 PLEKHA2Q9HB19 425 aa10.88□□□□□ -0.67
CTSB-230ENST00000534149 TRDV1A0A1B0GX56 115 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 AADACL3Q5VUY0 350 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 FAM90A2PQ658T7 463 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 LEMD1Q68G75 181 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 ZNF818PQ6ZRF7 136 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 ZNF367Q7RTV3 350 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
CTSB-230ENST00000534149 CMTM3Q96MX0 182 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 NDUFA4L2Q9NRX3 87 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 NDUFB11Q9NX14 153 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 COMMD9Q9P000 198 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 NSG2Q9Y328 171 aa10.87□□□□□ -0.67
CTSB-230ENST00000534149 AGRNO00468 2067 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 C15orf61A6NNL5 157 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 NUPL2O15504 423 aaKnown RBP10.86□□□□□ -0.67
CTSB-230ENST00000534149 SCGNO76038 276 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 FCER2P06734 321 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 AQP4P55087 323 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 ERVK-16P61578 105 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 RELQ04864 619 aaPredicted RBP10.86□□□□□ -0.67
CTSB-230ENST00000534149 TBCEQ15813 527 aaPredicted RBP10.86□□□□□ -0.67
CTSB-230ENST00000534149 Q6ZTC4 211 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 TCF24Q7RTU0 167 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 TMEM17Q86X19 198 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 OR10C1Q96KK4 312 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 HRH4Q9H3N8 390 aa10.86□□□□□ -0.67
CTSB-230ENST00000534149 IGHV4-4A0A075B6R2 117 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 TRAV14DV4A0A0A6YYC5 116 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 IGHV4-28A0A0C4DH34 117 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 MARCH11A6NNE9 402 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 NOTOA8MTQ0 251 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
CTSB-230ENST00000534149 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 DEFB131AP59861 70 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 PAFAH1B2P68402 229 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 RBMY1FQ15415 496 aaKnown RBP10.85□□□□□ -0.67
CTSB-230ENST00000534149 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
CTSB-230ENST00000534149 TRAV10A0A0B4J240 114 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 PRSS29PA6NIE9 313 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 HOGA1Q86XE5 327 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 FAM24BQ8N5W8 94 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 GIMAP1Q8WWP7 306 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 ST8SIA2Q92186 375 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 DGCR14Q96DF8 476 aaKnown RBP10.84□□□□□ -0.67
CTSB-230ENST00000534149 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 RHBDL2Q9NX52 303 aa10.84□□□□□ -0.67
CTSB-230ENST00000534149 DNASE2O00115 360 aaPredicted RBP10.83□□□□□ -0.68
CTSB-230ENST00000534149 IGHV3-48P01763 117 aa10.83□□□□□ -0.68
CTSB-230ENST00000534149 RLN1P04808 185 aa10.83□□□□□ -0.68
CTSB-230ENST00000534149 LILRB2Q8N423 598 aa10.83□□□□□ -0.68
CTSB-230ENST00000534149 SLC25A46Q96AG3 418 aa10.83□□□□□ -0.68
CTSB-230ENST00000534149 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
CTSB-230ENST00000534149 NXF2Q9GZY0 626 aaKnown RBP10.83□□□□□ -0.68
CTSB-230ENST00000534149 TRAV18A0A075B6X5 111 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 IGHV3-66A0A0C4DH42 116 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 DBX1A6NMT0 343 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 I3L2K1 104 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 RTL8CO15255 209 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 SNAPC5O75971 98 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 KRASP01116 189 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 APOHP02749 345 aaPredicted RBP10.82□□□□□ -0.68
CTSB-230ENST00000534149 EIF4EP06730 217 aaKnown RBP10.82□□□□□ -0.68
CTSB-230ENST00000534149 GIG44P09565 113 aaPredicted RBP10.82□□□□□ -0.68
CTSB-230ENST00000534149 GNRHRP30968 328 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 G6PCP35575 357 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 MFAP4P55083 255 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 STHQ8IWL8 128 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 OR1P1Q8NH06 330 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 TMEM56Q96MV1 263 aa10.82□□□□□ -0.68
CTSB-230ENST00000534149 RRP15Q9Y3B9 282 aaKnown RBP10.82□□□□□ -0.68
CTSB-230ENST00000534149 HSPG2P98160 4391 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
CTSB-230ENST00000534149 M0R2N4 97 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 DFFBO76075 338 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 MIFP14174 115 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 F2RP25116 425 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 LPAR6P43657 344 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 HERV-K104P61576 105 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 RPL11P62913 178 aaKnown RBP10.81□□□□□ -0.68
CTSB-230ENST00000534149 PVRIGQ6DKI7 326 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 SFXN4Q6P4A7 337 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 SLC25A38Q96DW6 304 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 RNF126Q9BV68 326 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 VSIRQ9H7M9 311 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 TXNL4BQ9NX01 149 aaKnown RBP10.81□□□□□ -0.68
CTSB-230ENST00000534149 PRNDQ9UKY0 176 aa10.81□□□□□ -0.68
CTSB-230ENST00000534149 MEIS3P1A6NDR6 274 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 PGLYRP1O75594 196 aaPredicted RBP10.8□□□□□ -0.68
CTSB-230ENST00000534149 MT-CO2P00403 227 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 CD5P06127 495 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 C4BPBP20851 252 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 TOMM20LQ6UXN7 152 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 ZNF767PQ75MW2 155 aa10.8□□□□□ -0.68
CTSB-230ENST00000534149 TRPT1Q86TN4 253 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms