RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 LYG2Q86SG7 212 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 LINC00482Q8N8I6 264 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 NECAP1Q8NC96 275 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 OR11H1Q8NG94 326 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 NUDT15Q9NV35 164 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 FBXL7Q9UJT9 491 aa19.18■□□□□ 0.66
USP48-214ENST00000532737 IGLV11-55A0A075B6I3 123 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 FAM223BA6NKX1 122 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 NDUFB8O95169 186 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 IFNA17P01571 189 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 HLA-AP01891 365 aaKnown RBP19.17■□□□□ 0.66
USP48-214ENST00000532737 RAB25P57735 213 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 ATP5G2Q06055 141 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 FHL3Q13643 280 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 C4orf46Q504U0 113 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 FAM223AQ8IWN6 122 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 WFDC9Q8NEX5 89 aa19.17■□□□□ 0.66
USP48-214ENST00000532737 HIST1H1BP16401 226 aaKnown RBP19.16■□□□□ 0.66
USP48-214ENST00000532737 MFAP2P55001 183 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 DEFA6Q01524 100 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 ZNF343Q6P1L6 599 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 OR2C3Q8N628 320 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 PDCD10Q9BUL8 212 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 PLEKHA3Q9HB20 300 aa19.16■□□□□ 0.66
USP48-214ENST00000532737 IGHV4OR15-8A0A075B7B6 117 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 A0A087WW49 117 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 PIGBOS1A0A0B4J2F0 54 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 DUXBA0A1W2PPF3 345 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 H2AFB2P0C5Z0 115 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 SULT1A3P0DMM9 295 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 SULT1A4P0DMN0 295 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 C15orf32Q32M92 178 aa19.15■□□□□ 0.66
USP48-214ENST00000532737 F11RQ9Y624 299 aaKnown RBP19.15■□□□□ 0.66
USP48-214ENST00000532737 NOTCH3Q9UM47 2321 aa19.14■□□□□ 0.66
USP48-214ENST00000532737 ANKRD34BA5PLL1 514 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 DUS4LO95620 317 aaKnown RBP19.14■□□□□ 0.65
USP48-214ENST00000532737 SPCS3P61009 180 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 ZNF616Q08AN1 781 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 EXOSC2Q13868 293 aaKnown RBP19.14■□□□□ 0.65
USP48-214ENST00000532737 OR52B4Q8NGK2 314 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 OR52E5Q8NH55 327 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 DPF1Q92782 380 aa19.14■□□□□ 0.65
USP48-214ENST00000532737 HSPB1P04792 205 aaKnown RBP19.13■□□□□ 0.65
USP48-214ENST00000532737 HOXB5P09067 269 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 CD33P20138 364 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 SMCO1Q147U7 214 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 SLC25A24Q6NUK1 477 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 NRARPQ7Z6K4 114 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 ENKURQ8TC29 256 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 S4R3C0 116 aa19.13■□□□□ 0.65
USP48-214ENST00000532737 A0A1B0GU03 582 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 INS-IGF2F8WCM5 200 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 LINC01619G3V211 115 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 NXPH3O95157 252 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 TRBV12-3P01733 135 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 ERHP84090 104 aaKnown RBP19.12■□□□□ 0.65
USP48-214ENST00000532737 GGNBP1Q5YKI7 109 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 COQ8AQ8NI60 647 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 TMED3Q9Y3Q3 217 aa19.12■□□□□ 0.65
USP48-214ENST00000532737 HOXA1P49639 335 aaPredicted RBP19.11■□□□□ 0.65
USP48-214ENST00000532737 DEFA1P59665 94 aa19.11■□□□□ 0.65
USP48-214ENST00000532737 DEFA3P59666 94 aa19.11■□□□□ 0.65
USP48-214ENST00000532737 DUSP18Q8NEJ0 188 aa19.11■□□□□ 0.65
USP48-214ENST00000532737 OR1P1Q8NH06 330 aa19.11■□□□□ 0.65
USP48-214ENST00000532737 SEC22CQ9BRL7 303 aa19.11■□□□□ 0.65
USP48-214ENST00000532737 RANGRFQ9HD47 186 aaPredicted RBP19.11■□□□□ 0.65
USP48-214ENST00000532737 PEF1Q9UBV8 284 aaKnown RBP19.11■□□□□ 0.65
USP48-214ENST00000532737 MFSD2BA6NFX1 497 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 PITX3O75364 302 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 ADAP1O75689 374 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 IGHV3-23P01764 117 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 OR8U8P0C7N1 319 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 SLURP1P55000 103 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 ZNF114Q8NC26 417 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 MITD1Q8WV92 249 aa19.1■□□□□ 0.65
USP48-214ENST00000532737 PRKDCP78527 4128 aaKnown RBP19.1■□□□□ 0.65
USP48-214ENST00000532737 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.09■□□□□ 0.65
USP48-214ENST00000532737 CYB5BO43169 146 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 IGLL1P15814 213 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 OR1L6Q8NGR2 347 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 OR1S1Q8NH92 325 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 ENY2Q9NPA8 101 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 THYN1Q9P016 225 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 HSPB7Q9UBY9 170 aa19.09■□□□□ 0.65
USP48-214ENST00000532737 CEBPZOSA8MTT3 80 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 SLC25A6P12236 298 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 SNCAP37840 140 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 TNFRSF9Q07011 255 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 C11orf87Q6NUJ2 197 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 ZNF431Q8TF32 576 aaPredicted RBP19.08■□□□□ 0.64
USP48-214ENST00000532737 DCUN1D4Q92564 292 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 EEF1AKMT3Q96AZ1 226 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 CCDC140Q96MF4 163 aa19.08■□□□□ 0.64
USP48-214ENST00000532737 RNASE2P10153 161 aaKnown RBP19.07■□□□□ 0.64
USP48-214ENST00000532737 HOXD3P31249 432 aaPredicted RBP19.07■□□□□ 0.64
USP48-214ENST00000532737 DLX4Q92988 240 aaPredicted RBP19.07■□□□□ 0.64
USP48-214ENST00000532737 CXorf58Q96LI9 332 aa19.07■□□□□ 0.64
USP48-214ENST00000532737 CACFD1Q9UGQ2 172 aa19.07■□□□□ 0.64
USP48-214ENST00000532737 IGHV3-21A0A0B4J1V1 117 aa19.06■□□□□ 0.64
USP48-214ENST00000532737 MPTX1A8MV57 137 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms