RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 UXS1Q8NBZ7 420 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 OR4D10Q8NGI6 311 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 DYNC2LI1Q8TCX1 351 aa13.02□□□□□ -0.33
PHRF1-204ENST00000532550 IGHV3-21A0A0B4J1V1 117 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 C3orf85A0A1B0GTC6 90 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 OR2T8A6NH00 312 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 A8MWP6 167 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 MFAP2P55001 183 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 HSPE1P61604 102 aaKnown RBP13.01□□□□□ -0.33
PHRF1-204ENST00000532550 MEF2DQ14814 521 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 TM4SF20Q53R12 229 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 ZNF57Q68EA5 555 aaPredicted RBP13.01□□□□□ -0.33
PHRF1-204ENST00000532550 SCARB1Q8WTV0 552 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 CACNG8Q8WXS5 425 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 C21orf62Q9NYP8 219 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 CCDC59Q9P031 241 aaKnown RBP13.01□□□□□ -0.33
PHRF1-204ENST00000532550 UFC1Q9Y3C8 167 aa13.01□□□□□ -0.33
PHRF1-204ENST00000532550 TMEM213A2RRL7 107 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 DISC1C4P0D8 188 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 ELLP55199 621 aaPredicted RBP13□□□□□ -0.33
PHRF1-204ENST00000532550 ERHP84090 104 aaKnown RBP13□□□□□ -0.33
PHRF1-204ENST00000532550 SPSB3Q6PJ21 355 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 OR1P1Q8NH06 330 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 MARC2Q969Z3 335 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 BSCL2Q96G97 398 aaPredicted RBP13□□□□□ -0.33
PHRF1-204ENST00000532550 TP53RKQ96S44 253 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 ATP6V0BQ99437 205 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
PHRF1-204ENST00000532550 C6orf62Q9GZU0 229 aaPredicted RBP13□□□□□ -0.33
PHRF1-204ENST00000532550 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
PHRF1-204ENST00000532550 CTDSPLO15194 276 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 CTSDP07339 412 aaPredicted RBP12.99□□□□□ -0.33
PHRF1-204ENST00000532550 AKR1C2P52895 323 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 PRCDQ00LT1 54 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 HAGHQ16775 308 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 Q56UQ5 140 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 OR2C3Q8N628 320 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 UBAC2Q8NBM4 344 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 SMIM4Q8WVI0 70 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
PHRF1-204ENST00000532550 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
PHRF1-204ENST00000532550 PLEKHA3Q9HB20 300 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
PHRF1-204ENST00000532550 C3orf84H3BNL1 204 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 K7EIM0 57 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 CD7P09564 240 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 C8orf88P0DMB2 117 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 IZUMO4Q1ZYL8 232 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 SP6Q3SY56 376 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 RBPMS2Q6ZRY4 209 aaKnown RBP12.98□□□□□ -0.33
PHRF1-204ENST00000532550 SLC16A13Q7RTY0 426 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 GAR1Q9NY12 217 aaKnown RBP12.98□□□□□ -0.33
PHRF1-204ENST00000532550 MLXQ9UH92 298 aa12.98□□□□□ -0.33
PHRF1-204ENST00000532550 C14orf166Q9Y224 244 aaKnown RBP12.98□□□□□ -0.33
PHRF1-204ENST00000532550 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 H3BMQ9 156 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 NDUFA4O00483 81 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 IFNA17P01571 189 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 IGKV1-5P01602 117 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 FAAP20Q6NZ36 180 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 BTNL8Q6UX41 500 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 TMEM61Q8N0U2 210 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 DEFB125Q8N687 156 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 RRNAD1Q96FB5 475 aaKnown RBP12.97□□□□□ -0.33
PHRF1-204ENST00000532550 SPATA25Q9BR10 227 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 PDCD10Q9BUL8 212 aa12.97□□□□□ -0.33
PHRF1-204ENST00000532550 RSL24D1Q9UHA3 163 aaKnown RBP12.97□□□□□ -0.33
PHRF1-204ENST00000532550 TRAV25A0A0B4J276 109 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 A0A0B4J293 547 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
PHRF1-204ENST00000532550 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
PHRF1-204ENST00000532550 SNCAP37840 140 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 MFAP4P55083 255 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 SURF2Q15527 256 aaPredicted RBP12.96□□□□□ -0.33
PHRF1-204ENST00000532550 SLC35G3Q8N808 338 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 ZNF114Q8NC26 417 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 OR52B4Q8NGK2 314 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.33
PHRF1-204ENST00000532550 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 ISOC1Q96CN7 298 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 C20orf24Q9BUV8 137 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 SLIRPQ9GZT3 109 aaKnown RBP12.96□□□□□ -0.33
PHRF1-204ENST00000532550 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.33
PHRF1-204ENST00000532550 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 NUPL2O15504 423 aaKnown RBP12.95□□□□□ -0.34
PHRF1-204ENST00000532550 CTSGP08311 255 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 UCP1P25874 307 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 TNFSF8P32971 234 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 SPINK9Q5DT21 86 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms