RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 C2orf68Q2NKX9 166 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 KRTAP24-1Q3LI83 254 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 ASPHD1Q5U4P2 390 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 CTRB2Q6GPI1 263 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 UNQ5815/PRO19632Q6UWF5 114 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 ZNF114Q8NC26 417 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 LFNGQ8NES3 379 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
COPB1-208ENST00000532088 ENY2Q9NPA8 101 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 MGAT4CQ9UBM8 478 aa9.81□□□□□ -0.84
COPB1-208ENST00000532088 PSMB11A5LHX3 300 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 FAM25EA8MYX2 175 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 ELANEP08246 267 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 SRSF2Q01130 221 aaKnown RBP9.8□□□□□ -0.84
COPB1-208ENST00000532088 ECSCRQ19T08 205 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 OR2C3Q8N628 320 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 RNF152Q8N8N0 203 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 NOL4LQ96MY1 436 aaPredicted RBP9.8□□□□□ -0.84
COPB1-208ENST00000532088 RNF114Q9Y508 228 aa9.8□□□□□ -0.84
COPB1-208ENST00000532088 HMX3A6NHT5 357 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 CYB5BO43169 146 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 SYNGR2O43760 224 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 OPN1MWP04001 364 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 OPN1MW2P0DN77 364 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 OPN1MW3P0DN78 364 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 HIST1H1BP16401 226 aaKnown RBP9.79□□□□□ -0.84
COPB1-208ENST00000532088 HTR2BP41595 481 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 HOXA1P49639 335 aaPredicted RBP9.79□□□□□ -0.84
COPB1-208ENST00000532088 H2BFSP57053 126 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 TAS2R30P59541 319 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 WT1-ASQ06250 92 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 FOXE3Q13461 319 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 FCN2Q15485 313 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 BSXQ3C1V8 233 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
COPB1-208ENST00000532088 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
COPB1-208ENST00000532088 NOXA1Q86UR1 476 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 OR11H7Q8NGC8 314 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 DTD1Q8TEA8 209 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 CHAC2Q8WUX2 184 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 HIPK2Q9H2X6 1198 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 RBKSQ9H477 322 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 SLA2Q9H6Q3 261 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 GSKIPQ9P0R6 139 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 WSB1Q9Y6I7 421 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 C2CD3Q4AC94 2353 aa9.79□□□□□ -0.84
COPB1-208ENST00000532088 G3V318 75 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 GIPP09681 153 aaPredicted RBP9.78□□□□□ -0.84
COPB1-208ENST00000532088 OR13C7P0DN81 318 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 AREGP15514 252 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 MDKP21741 143 aaPredicted RBP9.78□□□□□ -0.84
COPB1-208ENST00000532088 PSMB8P28062 276 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.846e-12■■■■■ 37.5
COPB1-208ENST00000532088 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 KLHDC1Q8N7A1 406 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 OR10W1Q8NGF6 305 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 OR1P1Q8NH06 330 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 RAB40CQ96S21 281 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 ZNF436Q9C0F3 470 aaPredicted RBP9.78□□□□□ -0.84
COPB1-208ENST00000532088 F11RQ9Y624 299 aaKnown RBP9.78□□□□□ -0.84
COPB1-208ENST00000532088 U3KQ87 197 aa9.78□□□□□ -0.84
COPB1-208ENST00000532088 TET2Q6N021 2002 aaPredicted RBP9.78□□□□□ -0.84
COPB1-208ENST00000532088 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
COPB1-208ENST00000532088 TRBV9A0A0B4J1U6 114 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 K7EPK0 472 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 CORTO00230 105 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 WRBO00258 174 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 SIX6O95475 246 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 MBPP02686 304 aaPredicted RBP9.77□□□□□ -0.85
COPB1-208ENST00000532088 PET100P0DJ07 73 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 CXCL3P19876 107 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
COPB1-208ENST00000532088 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 C2orf83Q53S99 150 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 AWAT1Q58HT5 328 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 OR4X2Q8NGF9 303 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 SMIM8Q96KF7 97 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 HEYLQ9NQ87 328 aaPredicted RBP9.77□□□□□ -0.85
COPB1-208ENST00000532088 THYN1Q9P016 225 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
COPB1-208ENST00000532088 RCL1Q9Y2P8 373 aaKnown RBP9.77□□□□□ -0.85
COPB1-208ENST00000532088 JMJD1CQ15652 2540 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 IGLV11-55A0A075B6I3 123 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 FAM223BA6NKX1 122 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 SOX15O60248 233 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 TSC22D2O75157 780 aa9.76□□□□□ -0.85
COPB1-208ENST00000532088 SCAF4O95104 1147 aaKnown RBP9.76□□□□□ -0.85
COPB1-208ENST00000532088 RLN2P04090 185 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms