RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 APC2O95996 2303 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 WDFY4Q6ZS81 3184 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 IGKV1D-17A0A075B6S4 117 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 CD99P14209 185 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 RAB4AP20338 218 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 BPIFB3P59826 476 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 RELBQ01201 579 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 HCP5Q6MZN7 132 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 OR10W1Q8NGF6 305 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 OR9G1Q8NH87 305 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 IGHV1-18A0A0C4DH31 117 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 M0R2Z0 102 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 WISP2O76076 250 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 C21orf62-AS1Q17RA5 79 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 WDR31Q8NA23 367 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
NXF1-211ENST00000531709 FLYWCH2Q96CP2 140 aaKnown RBP9.37□□□□□ -0.91
NXF1-211ENST00000531709 YPEL1O60688 119 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 TFPI2P48307 235 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 ZNF134P52741 427 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 GCSAMQ8N6F7 178 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 YPEL2Q96QA6 119 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 GP6Q9HCN6 339 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 COL5A1P20908 1838 aaPredicted RBP9.36□□□□□ -0.91
NXF1-211ENST00000531709 C15orf61A6NNL5 157 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 HSBP1L1C9JCN9 74 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 ZNF137PP52743 207 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
NXF1-211ENST00000531709 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 OR2T6Q8NHC8 308 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 POLR3KQ9Y2Y1 108 aaPredicted RBP9.36□□□□□ -0.91
NXF1-211ENST00000531709 FREM2Q5SZK8 3169 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
NXF1-211ENST00000531709 COL8A2P25067 703 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
NXF1-211ENST00000531709 CT45A1Q5HYN5 189 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 CT45A3Q8NHU0 189 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 NPIPB3Q92617 1050 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
NXF1-211ENST00000531709 C8orf88P0DMB2 117 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 KLHDC1Q8N7A1 406 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 PYGO2Q9BRQ0 406 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 AMMECR1Q9Y4X0 333 aaPredicted RBP9.35□□□□□ -0.91
NXF1-211ENST00000531709 PMS2P5A8MQ11 134 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 M0QZK8 103 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 CHEK1O14757 476 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 CSN3P07498 182 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 SP9P0CG40 484 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 CD59P13987 128 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 C11orf53Q8IXP5 236 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 CDKN1AP38936 164 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 GPR6P46095 362 aaPredicted RBP9.35□□□□□ -0.91
NXF1-211ENST00000531709 BRWD1-AS2P59051 145 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 PRB3Q04118 309 aaPredicted RBP9.35□□□□□ -0.91
NXF1-211ENST00000531709 C1orf194Q5T5A4 169 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 OR1L8Q8NGR8 309 aa9.35□□□□□ -0.91
NXF1-211ENST00000531709 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 MKRN2OSH3BPM6 223 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 TCF21O43680 179 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 RPL8P62917 257 aaKnown RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 FAM27E3Q08E93 113 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 LINC00479Q96M42 142 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 GNB4Q9HAV0 340 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 DNAJC4Q9NNZ3 241 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 SLC25A10Q9UBX3 287 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 TECTAO75443 2155 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 NCKAP5O14513 1909 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 M0R296 226 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 CNIH1O95406 144 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 PYYP10082 97 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 TNFRSF1AP19438 455 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 CENPVQ7Z7K6 275 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 BEND2Q8NDZ0 799 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 RAB1CQ92928 201 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 GAL3ST2Q9H3Q3 398 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 NRN1Q9NPD7 142 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 A0A1W2PNU3 283 aaPredicted RBP9.34□□□□□ -0.91
NXF1-211ENST00000531709 F2Z2F3 143 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 C11orf42Q8N5U0 333 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 PRR7Q8TB68 274 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 IFI27L2Q9H2X8 130 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 NBEAQ8NFP9 2946 aa9.34□□□□□ -0.91
NXF1-211ENST00000531709 NDUFB3O43676 98 aa9.33□□□□□ -0.92
NXF1-211ENST00000531709 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms