RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 Q6ZR03 302 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 LINC00696Q6ZRV3 163 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 TEX45Q8NA69 505 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 C21orf140B9A014 251 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 B4GALT1P15291 398 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 GATA3P23771 443 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 LINC00479Q96M42 142 aa11.68□□□□□ -0.54
PCF11-204ENST00000530660 TMEM265A0A087WTH1 108 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A10PA6NDY2 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A18PA6NE21 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A16PA6NEW6 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A20PA6NIJ5 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A8PA6NJQ4 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A7PA6NKC0 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A22PA8MWA6 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A12PA8MX19 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A5PA8MXJ8 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A23PA8MXZ1 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A15PP0C7V4 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A13PP0C7W8 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A14PP0C7W9 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FAM90A24PP0C7X0 464 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FTH1P19P0C7X4 201 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 PSG5Q15238 335 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 LYSMD4Q5XG99 296 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 SHISA2Q6UWI4 295 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 FGFBP3Q8TAT2 258 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 LRRC29Q8WV35 223 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 C1RLQ9NZP8 487 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 P0C879 139 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 AESQ08117 197 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 ADAMTSL5Q6ZMM2 481 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
PCF11-204ENST00000530660 C17orf98A8MV24 154 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 ATP5G2Q06055 141 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 TM4SF20Q53R12 229 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 FAM27BQ5VT28 67 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 MIR17HGQ75NE6 70 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 DEFB119Q8N690 84 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 FAM216AQ8WUB2 273 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 TMEM54Q969K7 222 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 PLPPR2Q96GM1 343 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 OR2V2Q96R30 315 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 C5orf67F2Z3F1 127 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 CELA3AP09093 270 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 NRN1LQ496H8 165 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 H1FXQ92522 213 aaKnown RBP11.66□□□□□ -0.54
PCF11-204ENST00000530660 BADQ92934 168 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 TRIB1Q96RU8 372 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 LILRA5A6NI73 299 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 KLK10O43240 276 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 BRWD1-AS2P59051 145 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 FAM214BQ7L5A3 538 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 R4GN57 208 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 FRYLO94915 3013 aa11.66□□□□□ -0.54
PCF11-204ENST00000530660 ANKRD30BLA7E2S9 258 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 SP9P0CG40 484 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 MYF5P13349 255 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
PCF11-204ENST00000530660 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 SS18L2Q9UHA2 77 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 HCFC1P51610 2035 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 A0A1B0GX78 115 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 FABP2P12104 132 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 GUSBP1Q15486 140 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
PCF11-204ENST00000530660 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 DYSFO75923 2080 aa11.65□□□□□ -0.54
PCF11-204ENST00000530660 WFDC2Q14508 124 aa11.65□□□□□ -0.55
PCF11-204ENST00000530660 MKXQ8IYA7 352 aa11.65□□□□□ -0.55
PCF11-204ENST00000530660 C1orf159Q96HA4 380 aa11.65□□□□□ -0.55
PCF11-204ENST00000530660 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.55
PCF11-204ENST00000530660 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 LINC01565O15544 149 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 OR2J3O76001 311 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 FGF6P10767 208 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 AREGP15514 252 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
PCF11-204ENST00000530660 LTC4SQ16873 150 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 MRPL21Q7Z2W9 205 aaKnown RBP11.64□□□□□ -0.55
PCF11-204ENST00000530660 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 C1QTNF5Q9BXJ0 243 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 KIAA0100Q14667 2235 aaKnown RBP11.64□□□□□ -0.55
PCF11-204ENST00000530660 SDK1Q7Z5N4 2213 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
PCF11-204ENST00000530660 TMEM189A5PLL7 270 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms