RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 IFNA17P01571 189 aa16.54■□□□□ 0.24
CAPN1-220ENST00000530567 SLC25A6P12236 298 aa16.54■□□□□ 0.24
CAPN1-220ENST00000530567 OR2C3Q8N628 320 aa16.54■□□□□ 0.24
CAPN1-220ENST00000530567 PLEKHA3Q9HB20 300 aa16.54■□□□□ 0.24
CAPN1-220ENST00000530567 IGLV11-55A0A075B6I3 123 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 INS-IGF2F8WCM5 200 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 MFAP2P55001 183 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 SPCS3P61009 180 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 C8orf86Q6ZUL3 223 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 C4orf3Q8WVX3 66 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 PDCD10Q9BUL8 212 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 NXPH3O95157 252 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 RHOGP84095 191 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 ETV3LQ6ZN32 361 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 HSPB7Q9UBY9 170 aa16.53■□□□□ 0.24
CAPN1-220ENST00000530567 F11RQ9Y624 299 aaKnown RBP16.53■□□□□ 0.24
CAPN1-220ENST00000530567 NUDT19A8MXV4 375 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 I3L521 148 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 OR2J3O76001 311 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 C11orf87Q6NUJ2 197 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 ZNF114Q8NC26 417 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 OR5B12Q96R08 314 aa16.52■□□□□ 0.23
CAPN1-220ENST00000530567 FAM223BA6NKX1 122 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 PRAF2O60831 178 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 DHFRP00374 187 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 IGHV3-11P01762 117 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 HOXA1P49639 335 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-220ENST00000530567 RUNX1Q01196 453 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 TNFRSF9Q07011 255 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 DEFB136Q30KP8 78 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 FAM223AQ8IWN6 122 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 C12orf45Q8N5I9 185 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-220ENST00000530567 NECAP1Q8NC96 275 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 OR1S1Q8NH92 325 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 P2RX4Q99571 388 aa16.51■□□□□ 0.23
CAPN1-220ENST00000530567 NDUFB8O95169 186 aa16.5■□□□□ 0.23
CAPN1-220ENST00000530567 LGALS1P09382 135 aaKnown RBP16.5■□□□□ 0.23
CAPN1-220ENST00000530567 DEFA4P12838 97 aa16.5■□□□□ 0.23
CAPN1-220ENST00000530567 PRR31Q5SQ13 230 aa16.5■□□□□ 0.23
CAPN1-220ENST00000530567 MRPL41Q8IXM3 137 aaKnown RBP16.5■□□□□ 0.23
CAPN1-220ENST00000530567 RAX2Q96IS3 184 aa16.5■□□□□ 0.23
CAPN1-220ENST00000530567 USMG5Q96IX5 58 aa16.5■□□□□ 0.23
CAPN1-220ENST00000530567 A0A0G2JLM5 398 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 SNRPGP15A8MWD9 76 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 IFNA21P01568 189 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 HIST1H1BP16401 226 aaKnown RBP16.49■□□□□ 0.23
CAPN1-220ENST00000530567 BSXQ3C1V8 233 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 OR4F17Q8NGA8 305 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 OR1P1Q8NH06 330 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 OR10C1Q96KK4 312 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 DUX3Q96PT4 197 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 OR4F4Q96R69 305 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 CACFD1Q9UGQ2 172 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 FBXL7Q9UJT9 491 aa16.49■□□□□ 0.23
CAPN1-220ENST00000530567 CCSO14618 274 aa16.48■□□□□ 0.23
CAPN1-220ENST00000530567 ERHP84090 104 aaKnown RBP16.48■□□□□ 0.23
CAPN1-220ENST00000530567 C15orf32Q32M92 178 aa16.48■□□□□ 0.23
CAPN1-220ENST00000530567 RBKSQ9H477 322 aa16.48■□□□□ 0.23
CAPN1-220ENST00000530567 GPN1Q9HCN4 374 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-220ENST00000530567 C13orf42A0A1B0GVH6 325 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 CEBPZOSA8MTT3 80 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 FAM90A26D6RGX4 464 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 RNASE2P10153 161 aaKnown RBP16.47■□□□□ 0.23
CAPN1-220ENST00000530567 RGS21Q2M5E4 152 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 PVRIGQ6DKI7 326 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 ZNF343Q6P1L6 599 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 UXS1Q8NBZ7 420 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 OR4D5Q8NGN0 318 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 ENY2Q9NPA8 101 aa16.47■□□□□ 0.23
CAPN1-220ENST00000530567 C7orf66A4D0T2 115 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 CCL24O00175 119 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 ATP5G2Q06055 141 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 FHL3Q13643 280 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 EXOSC2Q13868 293 aaKnown RBP16.46■□□□□ 0.23
CAPN1-220ENST00000530567 TATDN3Q17R31 274 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 IAH1Q2TAA2 248 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-220ENST00000530567 SLC25A24Q6NUK1 477 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 PKD1L1Q8TDX9 2849 aa16.46■□□□□ 0.23
CAPN1-220ENST00000530567 MFSD2BA6NFX1 497 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 TRBV12-3P01733 135 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 OXA1LQ15070 435 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 ZBTB8BQ8NAP8 495 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-220ENST00000530567 OR1L6Q8NGR2 347 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 DTD1Q8TEA8 209 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 TMEM170AQ8WVE7 144 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 S4R3C0 116 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 CMYA5Q8N3K9 4069 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 K7EIM0 57 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 MYCNOSP40205 109 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 ID3Q02535 119 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 OR11H1Q8NG94 326 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 CCDC140Q96MF4 163 aa16.45■□□□□ 0.22
CAPN1-220ENST00000530567 HEYLQ9NQ87 328 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-220ENST00000530567 IGHV4OR15-8A0A075B7B6 117 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 A0A087WW49 117 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 CYB5BO43169 146 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 SNCAP37840 140 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 OR1N2Q8NGR9 330 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 MAGT1Q9H0U3 335 aa16.44■□□□□ 0.22
CAPN1-220ENST00000530567 THYN1Q9P016 225 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 692.8 ms