RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	XRCC3	O43542	346 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	PGLYRP1	O75594	196 aa	Predicted RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	KRAS	P01116	189 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RPL35A	P18077	110 aa	Known RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	LPAR6	P43657	344 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CMC4	P56277	68 aa	Predicted RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	REL	Q04864	619 aa	Predicted RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TSPAN14	Q8NG11	270 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	OR5B3	Q8NH48	314 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	FCAMR	Q8WWV6	532 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	DGCR14	Q96DF8	476 aa	Known RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TSC22D3	Q99576	134 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RNF167	Q9H6Y7	350 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	VCX3A	Q9NNX9	186 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	SMPX	Q9UHP9	88 aa		11.51	□□□□□ -0.57
TM9SF1-209	ENST00000530468	NUPL2	O15504	423 aa	Known RBP	11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	ZNF207	O43670	478 aa	Known RBP	11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	G6PC	P35575	357 aa		11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	OR1P1	Q8NH06	330 aa		11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	GATAD1	Q8WUU5	269 aa		11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	S100A16	Q96FQ6	103 aa	Known RBP	11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	ANAPC10	Q9UM13	185 aa		11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	NSG2	Q9Y328	171 aa		11.5	□□□□□ -0.57
TM9SF1-209	ENST00000530468	IGHV3OR16-8	A0A075B7F1	116 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	IGHV7-4-1	A0A0J9YVY3	117 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	GPR31	O00270	319 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CTSG	P08311	255 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	FCGR2B	P31994	310 aa	Predicted RBP	11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RFX2	P48378	723 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TAS2R46	P59540	309 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CROCCP3	Q8IVE0	287 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	OR10C1	Q96KK4	312 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RNF2	Q99496	336 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TXN2	Q99757	166 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RHPN1-AS1	Q9BWJ2	59 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CSTL1	Q9H114	145 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TMEM14B	Q9NUH8	114 aa		11.49	□□□□□ -0.57
TM9SF1-209	ENST00000530468	C15orf61	A6NNL5	157 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	MPTX1	A8MV57	137 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CHEK1	O14757	476 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	MFAP4	P55083	255 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	UBE2NL	Q5JXB2	153 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	LGALS9C	Q6DKI2	356 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	APRG1	Q8IVJ8	170 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TMEM116	Q8NCL8	245 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	OR5H2	Q8NGV7	314 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CMTM3	Q96MX0	182 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	FXYD6	Q9H0Q3	95 aa		11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.48	□□□□□ -0.57
TM9SF1-209	ENST00000530468	PMP2	P02689	132 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	CD5	P06127	495 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	NAT1	P18440	290 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	S100G	P29377	79 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	OR6F1	Q8NGZ6	308 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RARRES2	Q99969	163 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	MFF	Q9GZY8	342 aa		11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	C11orf68	Q9H3H3	251 aa	Known RBP	11.47	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TRAV14DV4	A0A0A6YYC5	116 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468		I3L2K1	104 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	YIF1A	O95070	293 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TAS2R20	P59543	309 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	PAFAH1B2	P68402	229 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	KCTD21	Q4G0X4	260 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	TMEM69	Q5SWH9	247 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	LPCAT3	Q6P1A2	487 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	RPP25L	Q8N5L8	163 aa	Known RBP	11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	ZNF114	Q8NC26	417 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	SLC25A46	Q96AG3	418 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	MISP3	Q96FF7	219 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	ZNF414	Q96IQ9	312 aa		11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	NXF2	Q9GZY0	626 aa	Known RBP	11.46	□□□□□ -0.57
TM9SF1-209	ENST00000530468	DBX1	A6NMT0	343 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	TNFAIP8	O95379	198 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	TFPI2	P48307	235 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	NEDD8	Q15843	81 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	FAM90A2P	Q658T7	463 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	OR4A16	Q8NH70	328 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468	GINS3	Q9BRX5	216 aa		11.45	□□□□□ -0.58
TM9SF1-209	ENST00000530468		A0A087WXM4	84 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	GNG7	O60262	68 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	MT-CO2	P00403	227 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	EIF4E	P06730	217 aa	Known RBP	11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	PRSS3	P35030	304 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	HRH1	P35367	487 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	PRCD	Q00LT1	54 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	ZNF124	Q15973	351 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	PHLDA2	Q53GA4	152 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	H2BFWT	Q7Z2G1	175 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	SAMD12	Q8N8I0	201 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	C11orf45	Q8TAV5	145 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	SEC22A	Q96IW7	307 aa		11.44	□□□□□ -0.58
TM9SF1-209	ENST00000530468	IGKV3-7	A0A075B6H7	116 aa		11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	IGHV3-49	A0A0A0MS15	119 aa		11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	DEDD	O75618	318 aa		11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	IFNA4	P05014	189 aa		11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	TSPAN5	P62079	268 aa		11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	RBMS2	Q15434	407 aa	Known RBP	11.43	□□□□□ -0.58
TM9SF1-209	ENST00000530468	TCF24	Q7RTU0	167 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms