RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HINT1P49773 126 aaPredicted RBP3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 EMP1P54849 157 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 ZNF532Q9HCE3 1301 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 SIPA1L1O43166 1804 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 TRAV41A0A0B4J266 112 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 SIGLEC16A6NMB1 481 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 HSPE1P61604 102 aaKnown RBP3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 RPP25LQ8N5L8 163 aaKnown RBP3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 OR4X2Q8NGF9 303 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 DNAJC30Q96LL9 226 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 PARVBQ9HBI1 364 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 GID8Q9NWU2 228 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 NEO1Q92859 1461 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 ATG2BQ96BY7 2078 aa3.07□□□□□ -1.92
CAPRIN1-208ENST00000530008 IGHV3-64A0A075B6Q5 118 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 H7C2G1 150 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 PPBPP02775 128 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 SMIM17P0DL12 118 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 DEFA4P12838 97 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 ERP29P30040 261 aaKnown RBP3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 DEFA3P59666 94 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 POU6F1Q14863 301 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 ZNF181Q2M3W8 571 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 SPANXN3Q5MJ09 141 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 GOLT1AQ6ZVE7 132 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 SLC25A40Q8TBP6 338 aa3.06□□□□□ -1.92
CAPRIN1-208ENST00000530008 RFPL4AA6NLU0 287 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 RFPL4AL1F8VTS6 287 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 KISS1Q15726 138 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 Q8NDZ9 215 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 RASSF5Q8WWW0 418 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 HOPXQ9BPY8 73 aaPredicted RBP3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
CAPRIN1-208ENST00000530008 HECW1Q76N89 1606 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 IGHV1-18A0A0C4DH31 117 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 TRAPPC13A5PLN9 417 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 BUB1B-PAK6H3BSN5 160 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 SLC22A1O15245 554 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 ATG12O94817 140 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 G6PCP35575 357 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 Q6Q795 121 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 NEK7Q8TDX7 302 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 GPR146Q96CH1 333 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 CHST6Q9GZX3 395 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 TVP23BQ9NYZ1 205 aa3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 UTP11Q9Y3A2 253 aaKnown RBP3.04□□□□□ -1.92
CAPRIN1-208ENST00000530008 ZNF407Q9C0G0 2248 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 TMSB15BA0A087X1C1 80 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 TRGV4A0A0C4DH28 118 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 HMGB3O15347 200 aaKnown RBP3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 OR2J2O76002 312 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 S1PR2O95136 353 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 RPS4Y1P22090 263 aaKnown RBP3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 ZNF80P51504 273 aaPredicted RBP3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 HES1Q14469 280 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 ZNF791Q3KP31 576 aaPredicted RBP3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 ARHGAP11BQ3KRB8 267 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 BPIFA4PQ86YQ2 179 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 C2orf50Q96LR7 162 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 VCX3BQ9H321 246 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 PYCARDQ9ULZ3 195 aa3.03□□□□□ -1.92
CAPRIN1-208ENST00000530008 IFNA1P01562 189 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 C1QBP02746 253 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 FABP1P07148 127 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 CDC42P60953 191 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 SUPT4H1P63272 117 aaKnown RBP3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 TERB2Q8NHR7 220 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 SELENOSQ9BQE4 189 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 SLC39A9Q9NUM3 307 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 ATPIF1Q9UII2 106 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 TRPM6Q9BX84 2022 aa3.02□□□□□ -1.93
CAPRIN1-208ENST00000530008 RALGAPA2Q2PPJ7 1873 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 A0A1B0GVG6 124 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 TRAPPC2LH3BP13 241 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 CIAO1O76071 339 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 NFYAP23511 347 aaPredicted RBP3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 EIF2B2P49770 351 aaKnown RBP3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 TMEM258P61165 79 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 B2MP61769 119 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 FAM27BQ5VT28 67 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 DNAJC9Q8WXX5 260 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 CXCL16Q9H2A7 254 aa3.01□□□□□ -1.93
CAPRIN1-208ENST00000530008 SDK2Q58EX2 2172 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 TRAV4A0A0B4J268 109 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 A0A0G2JQZ4 141 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 CLDN25C9JDP6 229 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 LY6LH3BQJ8 138 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 CASP1P29466 404 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 PEBP1P30086 187 aaKnown RBP3□□□□□ -1.93
CAPRIN1-208ENST00000530008 Q6ZTI0 123 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 CLVS1Q8IUQ0 354 aaPredicted RBP3□□□□□ -1.93
CAPRIN1-208ENST00000530008 SCGB3A1Q96QR1 104 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 ERGIC3Q9Y282 383 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 DENND4BO75064 1496 aaPredicted RBP3□□□□□ -1.93
CAPRIN1-208ENST00000530008 SLX4Q8IY92 1834 aa3□□□□□ -1.93
CAPRIN1-208ENST00000530008 NYNRINQ9P2P1 1898 aaKnown RBP2.99□□□□□ -1.93
CAPRIN1-208ENST00000530008 TRBV19A0A075B6N1 114 aa2.99□□□□□ -1.93
CAPRIN1-208ENST00000530008 A0A0D9SEW6 157 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms