RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 FAM209BQ5JX69 171 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 ZNF57Q68EA5 555 aaPredicted RBP12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 SGPP2Q8IWX5 399 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 RBPMSQ93062 196 aaKnown RBP12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
TSPAN4-218ENST00000529566 PPP5D1E7EU14 171 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 INS-IGF2F8WCM5 200 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 ST8SIA3O43173 380 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 AKR1C4P17516 323 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 RPEL1Q2QD12 228 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 CNPY1Q3B7I2 92 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 CLEC19AQ6UXS0 136 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 FAM219AQ8IW50 185 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 EEF1AKMT3Q96AZ1 226 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 KCNIP3Q9Y2W7 256 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 TGP01266 2768 aa12.31□□□□□ -0.44
TSPAN4-218ENST00000529566 TRBV7-1A0A0A6YYK4 115 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 SAP30O75446 220 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 HLA-AP01891 365 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 CLEC3BP05452 202 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 IL7P13232 177 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 TMEM268Q5VZI3 342 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 TRIQKQ629K1 86 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 SLC25A24Q6NUK1 477 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 ZNF114Q8NC26 417 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 OR1P1Q8NH06 330 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 VN1R17PQ8TDU5 208 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 IL22RA2Q969J5 263 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 GPR146Q96CH1 333 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 CXorf58Q96LI9 332 aa12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 ZMAT5Q9UDW3 170 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-218ENST00000529566 K7EIM0 57 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 OR2C1O95371 312 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 CSN3P07498 182 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 BTCP35070 178 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 MECP2P51608 486 aaKnown RBP12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 CCR6P51684 374 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 TMEM128Q5BJH2 165 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 SPINK9Q5DT21 86 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 MRAPQ8TCY5 172 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 THYN1Q9P016 225 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 SORL1Q92673 2214 aa12.29□□□□□ -0.44
TSPAN4-218ENST00000529566 NAP1L6A6NFF2 107 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 F8W735 103 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 CYB5BO43169 146 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 ARL3P36405 182 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 PVRIGQ6DKI7 326 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 OR1L6Q8NGR2 347 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 OR52E5Q8NH55 327 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 SCARB1Q8WTV0 552 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 OR4C12Q96R67 309 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 PLEKHA3Q9HB20 300 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
TSPAN4-218ENST00000529566 A0A0B4J2A0 478 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 I3L2K1 104 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 PLA2G10O15496 165 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 IFNA17P01571 189 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 IGLV1-51P01701 117 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 RBMS2Q15434 407 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 TATDN3Q17R31 274 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 NMSQ5H8A3 153 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 LYZL2Q7Z4W2 148 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 RNASE11Q8TAA1 199 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 PRR25Q96S07 402 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 CACNG5Q9UF02 275 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 SHPKQ9UHJ6 478 aa12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 ZNF256Q9Y2P7 627 aaPredicted RBP12.27□□□□□ -0.45
TSPAN4-218ENST00000529566 IGHV3-21A0A0B4J1V1 117 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 LINC00854A0A1B0GVQ3 168 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 LGALS9O00182 355 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 NDUFB6O95139 128 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 GPR183P32249 361 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 INPP1P49441 399 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 SPCS3P61009 180 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 ERHP84090 104 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 ANKRD55Q3KP44 614 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 LGI3Q8N145 548 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 ATP6V0BQ99437 205 aa12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 C7orf50Q9BRJ6 194 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-218ENST00000529566 DNAH9Q9NYC9 4486 aa12.25□□□□□ -0.45
TSPAN4-218ENST00000529566 ANXA3P12429 323 aa12.25□□□□□ -0.45
TSPAN4-218ENST00000529566 SPNP16150 400 aa12.25□□□□□ -0.45
TSPAN4-218ENST00000529566 SRPXP78539 464 aa12.25□□□□□ -0.45
TSPAN4-218ENST00000529566 PPP1R1AQ13522 171 aa12.25□□□□□ -0.45
TSPAN4-218ENST00000529566 BSXQ3C1V8 233 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms