RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TMEM167AQ8TBQ9 72 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 MRPL32Q9BYC8 188 aaKnown RBP6.82□□□□□ -1.32
CSTF3-208ENST00000528865 NAGKQ9UJ70 344 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 LINC00312Q9Y6C7 94 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
CSTF3-208ENST00000528865 INTS1Q8N201 2190 aaKnown RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 IGKV1OR2-108A0A075B7D4 117 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 KIR2DL5BA0A0G2JN68 375 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 KIR2DL5BA0A0G2JPC4 375 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 H0YJW9 148 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 DLL1O00548 723 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 CRYABP02511 175 aaKnown RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 IRF2P14316 349 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 CRYBB3P26998 211 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 PPOXP50336 477 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 TPPP2P59282 170 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 CX3CL1P78423 397 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 RPL19P84098 196 aaKnown RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 PSG5Q15238 335 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 RPEL1Q2QD12 228 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 CENPWQ5EE01 88 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 VHLLQ6RSH7 139 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 MRPL52Q86TS9 123 aaKnown RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 FAM216BQ8N7L0 139 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 OR1L6Q8NGR2 347 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 CMTM2Q8TAZ6 248 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 FAM57AQ8TBR7 257 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 ZNF714Q96N38 554 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 MS4A10Q96PG2 267 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 SLC25A33Q9BSK2 321 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 TMEM106BQ9NUM4 274 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 POLR3KQ9Y2Y1 108 aaPredicted RBP6.81□□□□□ -1.32
CSTF3-208ENST00000528865 DSCAMO60469 2012 aa6.81□□□□□ -1.32
CSTF3-208ENST00000528865 DSCAML1Q8TD84 2053 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 A0A1W2PN81 502 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 NKX6-3A6NJ46 265 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 SLC17A3O00476 420 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 MT-ND6P03923 174 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 IGKV1-16P04430 117 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 REG1AP05451 166 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 SAA1P0DJI8 122 aaPredicted RBP6.8□□□□□ -1.32
CSTF3-208ENST00000528865 CRISP2P16562 243 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 TNFRSF1AP19438 455 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 CBLN1P23435 193 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 GNG4P50150 75 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 GNG10P50151 68 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
CSTF3-208ENST00000528865 ERHP84090 104 aaKnown RBP6.8□□□□□ -1.32
CSTF3-208ENST00000528865 FAM27E3Q08E93 113 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 MLANAQ16655 118 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 WDR73Q6P4I2 378 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 C22orf34Q6ZV56 151 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 SSX8Q7RTT4 187 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 RPRMLQ8N4K4 120 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 RBMXL3Q8N7X1 1067 aaKnown RBP6.8□□□□□ -1.32
CSTF3-208ENST00000528865 THAP8Q8NA92 274 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 DEFB108BQ8NET1 73 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 C20orf144Q9BQM9 153 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 LRFN3Q9BTN0 628 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 GAL3ST2Q9H3Q3 398 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 DNAJC4Q9NNZ3 241 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 PRUNE2Q8WUY3 3088 aa6.8□□□□□ -1.32
CSTF3-208ENST00000528865 A0A1B0GUS0 222 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 SMIM27A0A1W2PRY6 76 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 CGB1A6NKQ9 187 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 C17orf100A8MU93 164 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 GGTLC3B5MD39 225 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 ACTL6BO94805 426 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 APOA2P02652 100 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 NDUFB7P17568 137 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 HNF1AP20823 631 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 USF1P22415 310 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-208ENST00000528865 COL8A2P25067 703 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 ZNF137PP52743 207 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 RPL8P62917 257 aaKnown RBP6.79□□□□□ -1.32
CSTF3-208ENST00000528865 OR5I1Q13606 314 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 TIGITQ495A1 244 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 OR10J3Q5JRS4 329 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 TMEM200BQ69YZ2 307 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 TMEM136Q6ZRR5 245 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 Q6ZWC4 215 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 MOB3BQ86TA1 216 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 PDPNQ86YL7 162 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 ST6GALNAC3Q8NDV1 305 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 OR9G1Q8NH87 305 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 ST6GALNAC6Q969X2 333 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 TMEM186Q96B77 213 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 MBD6Q96DN6 1003 aa6.79□□□□□ -1.32
CSTF3-208ENST00000528865 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms