RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 DHODHQ02127 395 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 SLC25A24Q6NUK1 477 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 LHFPL5Q8TAF8 219 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 EEF1AKMT3Q96AZ1 226 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 ZNF256Q9Y2P7 627 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-211ENST00000528563 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 CYB5BO43169 146 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
HIF3A-211ENST00000528563 OR2C1O95371 312 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 CLEC3BP05452 202 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 AKR1C2P52895 323 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 Q6ZRM9 215 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 SELENOHQ8IZQ5 122 aaKnown RBP12.84□□□□□ -0.35
HIF3A-211ENST00000528563 OR2C3Q8N628 320 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 GALNT14Q96FL9 552 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 PRR25Q96S07 402 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 TMEM56-RWDD3S4R434 201 aa12.84□□□□□ -0.35
HIF3A-211ENST00000528563 IGLV1-51P01701 117 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 HLA-AP01891 365 aaKnown RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 CSN3P07498 182 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 MECP2P51608 486 aaKnown RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 BAK1Q16611 211 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 GPHB5Q86YW7 130 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 SGPP2Q8IWX5 399 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 OR1L6Q8NGR2 347 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 OR1P1Q8NH06 330 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 RBPMSQ93062 196 aaKnown RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 SDHCQ99643 169 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 SIGLEC8Q9NYZ4 499 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 KCNIP3Q9Y2W7 256 aa12.83□□□□□ -0.36
HIF3A-211ENST00000528563 LSM4Q9Y4Z0 139 aaKnown RBP12.83□□□□□ -0.36
HIF3A-211ENST00000528563 ST8SIA3O43173 380 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 SPNP16150 400 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 ARL3P36405 182 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 SUPT4H1P63272 117 aaKnown RBP12.82□□□□□ -0.36
HIF3A-211ENST00000528563 TMEM187Q14656 261 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 AARDQ4LEZ3 155 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 FAM219AQ8IW50 185 aa12.82□□□□□ -0.36
HIF3A-211ENST00000528563 INS-IGF2F8WCM5 200 aa12.81□□□□□ -0.36
HIF3A-211ENST00000528563 LGALS9O00182 355 aa12.81□□□□□ -0.36
HIF3A-211ENST00000528563 AKR1C4P17516 323 aa12.81□□□□□ -0.36
HIF3A-211ENST00000528563 SLC25A21Q9BQT8 299 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-211ENST00000528563 K7EIM0 57 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 TMEM268Q5VZI3 342 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 ADAMTSL5Q6ZMM2 481 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 ZNF114Q8NC26 417 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 SCARB1Q8WTV0 552 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 IL22RA2Q969J5 263 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 GPR146Q96CH1 333 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-211ENST00000528563 PEMTQ9UBM1 199 aa12.8□□□□□ -0.36
HIF3A-211ENST00000528563 IFNA17P01571 189 aa12.79□□□□□ -0.36
HIF3A-211ENST00000528563 ERHP84090 104 aaKnown RBP12.79□□□□□ -0.36
HIF3A-211ENST00000528563 SPINK9Q5DT21 86 aa12.79□□□□□ -0.36
HIF3A-211ENST00000528563 ZNF57Q68EA5 555 aaPredicted RBP12.79□□□□□ -0.36
HIF3A-211ENST00000528563 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
HIF3A-211ENST00000528563 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
HIF3A-211ENST00000528563 A6NHS1 94 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 GPR183P32249 361 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 DCTN2Q13561 401 aaKnown RBP12.78□□□□□ -0.36
HIF3A-211ENST00000528563 FAM106AQ4KMX7 169 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 TMEM128Q5BJH2 165 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 C21orf62Q9NYP8 219 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 PRR13Q9NZ81 148 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 COL7A1Q02388 2944 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 IGHV3-21A0A0B4J1V1 117 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 F8W735 103 aaPredicted RBP12.78□□□□□ -0.36
HIF3A-211ENST00000528563 I3L2K1 104 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 LY86O95711 162 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 GP9P14770 177 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 SPCS3P61009 180 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 PVRIGQ6DKI7 326 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 PLET1Q6UQ28 207 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 ZC4H2Q9NQZ6 224 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 CACNG5Q9UF02 275 aa12.78□□□□□ -0.36
HIF3A-211ENST00000528563 A0A0B4J2A0 478 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 TGOLN2O43493 480 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 SNCAP37840 140 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 TRIQKQ629K1 86 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 TMED4Q7Z7H5 227 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.37
HIF3A-211ENST00000528563 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.37
HIF3A-211ENST00000528563 ZNF320A2RRD8 509 aa12.76□□□□□ -0.37
HIF3A-211ENST00000528563 OR2T8A6NH00 312 aa12.76□□□□□ -0.37
HIF3A-211ENST00000528563 ANXA3P12429 323 aa12.76□□□□□ -0.37
HIF3A-211ENST00000528563 FOLR2P14207 255 aa12.76□□□□□ -0.37
HIF3A-211ENST00000528563 ADMP35318 185 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms