RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ZNF479Q96JC4 524 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 SPAG8Q99932 426 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 MRPL32Q9BYC8 188 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 RTN4RQ9BZR6 473 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 A0A0G2JLM5 398 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 A0A1W2PRD5 423 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 A0A1W2PRF3 423 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 A0A1W2PRM7 423 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PRR32B1ATL7 298 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 DNAL4O96015 105 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 CKS2P33552 79 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 RAB9AP51151 201 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 SHISA5Q8N114 240 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PRR7Q8TB68 274 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 REPIN1Q9BWE0 567 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PLXNA2O75051 1894 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 CEACAM18A8MTB9 384 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 NTN3O00634 580 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PPP1R17O96001 155 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 TDGF1P13385 188 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 RPL27AP46776 148 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 ERVK11-1P61568 191 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 ACP7Q6ZNF0 438 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 DRAM1Q8N682 238 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 IL36RNQ9UBH0 155 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PRR19A6NJB7 356 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 LHX2P50458 406 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 MFAP4P55083 255 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 RPL8P62917 257 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 CFHR1Q03591 330 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 FAM53AQ6NSI3 398 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 CLDND2Q8NHS1 167 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 GFI1Q99684 422 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 SEPSECSQ9HD40 501 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 GRIFINA4D1Z8 144 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 LDLRAD4O15165 306 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 HYPMO75409 117 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 GPR6P46095 362 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 HSPE1P61604 102 aaKnown RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 NUP37Q8NFH4 326 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 FDCSPQ8NFU4 85 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF418Q8TF45 676 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-218ENST00000528232 SH3BGRL3Q9H299 93 aa6.1□□□□□ -1.43
CTNND1-218ENST00000528232 PLXNA4Q9HCM2 1894 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 ASXL3Q9C0F0 2248 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 GAGE5Q13069 117 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 GAGE6Q13070 117 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 LYZL4Q96KX0 146 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 RAXQ9Y2V3 346 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 RNF222A6NCQ9 220 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 IZUMO1RA6ND01 250 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 SERF1AO75920 110 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 C1QL1O75973 258 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 RHOGP84095 191 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF146Q15072 292 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 WNT10AQ9GZT5 417 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 IQCF6A8MYZ5 107 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 MST1P26927 711 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 FAM90A1Q86YD7 464 aa6.09□□□□□ -1.43
CTNND1-218ENST00000528232 ZG16O60844 167 aa6.09□□□□□ -1.44
CTNND1-218ENST00000528232 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 RTN4RL2Q86UN3 420 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 PRELID3AQ96N28 172 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 FOXD3Q9UJU5 478 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 UCP1P25874 307 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 GLRXP35754 106 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM78Q5T7P6 136 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 FAM89BQ8N5H3 189 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 SPXQ9BT56 116 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 SEMA5BQ9P283 1151 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 COL4A6Q14031 1691 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TRAV14DV4A0A0A6YYC5 116 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 EREGO14944 169 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 SS18L1O75177 396 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 CBLN1P23435 193 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TFPI2P48307 235 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 FOXL1Q12952 345 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 ATOH7Q8N100 152 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 DYNLRB2Q8TF09 96 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 GPHA2Q96T91 129 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 SCNM1Q9BWG6 230 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 F11RQ9Y624 299 aaKnown RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 IGKV3-7A0A075B6H7 116 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 IGHV1-2P23083 117 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TMEM105Q8N8V8 129 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 OR10J6PQ8NGY7 276 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 DLX4Q92988 240 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-218ENST00000528232 RNF115Q9Y4L5 304 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TRAV1-1A0A0B4J248 108 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 F8W1H4 67 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 CECR9P0C854 216 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 GZMBP10144 247 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 TSPOP30536 169 aa6.08□□□□□ -1.44
CTNND1-218ENST00000528232 MIC13Q5XKP0 118 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms