RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 SPACA3Q8IXA5 215 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 HES7Q9BYE0 225 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 GSX1Q9H4S2 264 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-214ENST00000528165 SAP30LQ9HAJ7 183 aa12.07□□□□□ -0.48
CAPN1-214ENST00000528165 DNAJC13O75165 2243 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 RASL11AQ6T310 242 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 IGF2BP2-AS1Q96M15 143 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 SSBP3Q9BWW4 388 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-214ENST00000528165 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-214ENST00000528165 C15orf61A6NNL5 157 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 MFAP2P55001 183 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 TAS2R45P59539 299 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 FAM214BQ7L5A3 538 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 C11orf53Q8IXP5 236 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 NHLRC2Q8NBF2 726 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 WIPF2Q8TF74 440 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-214ENST00000528165 PTPRBP23467 1997 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 HINT2Q9BX68 163 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 TTTY12Q9BZ98 90 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
CAPN1-214ENST00000528165 A0A1W2PN81 502 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 SMIM21Q3B7S5 101 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 FAM168AQ92567 244 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 NEUROG1Q92886 237 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 IGHV3-13P01766 116 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 IGHV3-7P01780 117 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 KIR2DS2P43631 304 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 RTL8BQ17RB0 113 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 LRRC10Q5BKY1 277 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 TRIB1Q96RU8 372 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 TNFRSF19Q9NS68 423 aa12.05□□□□□ -0.48
CAPN1-214ENST00000528165 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 MPV17P39210 176 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 HSPE1P61604 102 aaKnown RBP12.04□□□□□ -0.48
CAPN1-214ENST00000528165 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
CAPN1-214ENST00000528165 KLF5Q13887 457 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-214ENST00000528165 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 OR4S2Q8NH73 311 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 ZNF355PQ9NSJ1 428 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 M0QZ24 198 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 CXCL12P48061 93 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 SSPNQ14714 243 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 KLF14Q8TD94 323 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-214ENST00000528165 FAM122AQ96E09 287 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 TMEM70Q9BUB7 260 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
CAPN1-214ENST00000528165 DOCK10Q96BY6 2186 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 FNDC10F2Z333 226 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 PPBPP02775 128 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 ARG2P78540 354 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 ERASQ7Z444 233 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 TMEM251Q8N6I4 163 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 CBY3A6NI87 242 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 NTN3O00634 580 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-214ENST00000528165 GATA2P23769 480 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-214ENST00000528165 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 ASPHD1Q5U4P2 390 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 ABHD17BQ5VST6 288 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
CAPN1-214ENST00000528165 FOXA2Q9Y261 457 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-214ENST00000528165 K7ESF4 209 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 GPR6P46095 362 aaPredicted RBP12.02□□□□□ -0.48
CAPN1-214ENST00000528165 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 OR4A47Q6IF82 309 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 SMIM15Q7Z3B0 74 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 TMEM14BQ9NUH8 114 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 WASHC3Q9Y3C0 194 aa12.02□□□□□ -0.48
CAPN1-214ENST00000528165 LDLRAD2Q5SZI1 272 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 NUP35Q8NFH5 326 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 ZNF596Q8TC21 504 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 C19orf24Q9BVV8 132 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 SSBP4Q9BWG4 385 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-214ENST00000528165 ST20Q9HBF5 79 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 CLEC5AQ9NY25 188 aa12.02□□□□□ -0.49
CAPN1-214ENST00000528165 OR4C46A6NHA9 309 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 C8orf88P0DMB2 117 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 RHOGP84095 191 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 FAM90A1Q86YD7 464 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 CD177Q8N6Q3 437 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 CT55Q8WUE5 264 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 GRAMD2BQ96HH9 432 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 IFI27L2Q9H2X8 130 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 DUSP13Q9UII6 198 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 CAMPP49913 170 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 ZNF134P52741 427 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 MOB3BQ86TA1 216 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 LINC00479Q96M42 142 aa12.01□□□□□ -0.49
CAPN1-214ENST00000528165 CST9LQ9H4G1 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms