RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 C3orf85A0A1B0GTC6 90 aa24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 TMEM213A2RRL7 107 aa24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 ATG12O94817 140 aa24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 CTSDP07339 412 aaPredicted RBP24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 CBLN1P23435 193 aa24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 PRCDQ00LT1 54 aa24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 C6orf62Q9GZU0 229 aaPredicted RBP24.98■■□□□ 1.59
SSSCA1-205ENST00000527920 TGOLN2O43493 480 aa24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 P0C879 139 aa24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 HSPE1P61604 102 aaKnown RBP24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 SURF2Q15527 256 aaPredicted RBP24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 PLET1Q6UQ28 207 aa24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 BSCL2Q96G97 398 aaPredicted RBP24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 PALMDQ9NP74 551 aa24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 RSL24D1Q9UHA3 163 aaKnown RBP24.97■■□□□ 1.59
SSSCA1-205ENST00000527920 ZNF320A2RRD8 509 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 GSTZ1O43708 216 aaPredicted RBP24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 SPSB3Q6PJ21 355 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 OR2C3Q8N628 320 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 ZNF114Q8NC26 417 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 MARCH1Q8TCQ1 289 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 MARC2Q969Z3 335 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 ZNF436Q9C0F3 470 aaPredicted RBP24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 NXF2Q9GZY0 626 aaKnown RBP24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 C21orf62Q9NYP8 219 aa24.96■■□□□ 1.59
SSSCA1-205ENST00000527920 DISC1C4P0D8 188 aa24.95■■□□□ 1.58
SSSCA1-205ENST00000527920 IGKV1-5P01602 117 aa24.95■■□□□ 1.58
SSSCA1-205ENST00000527920 AKAIN1P0CW23 69 aa24.95■■□□□ 1.58
SSSCA1-205ENST00000527920 ELLP55199 621 aaPredicted RBP24.95■■□□□ 1.58
SSSCA1-205ENST00000527920 SCARB1Q8WTV0 552 aa24.95■■□□□ 1.58
SSSCA1-205ENST00000527920 ZNF785A8K8V0 405 aa24.94■■□□□ 1.58
SSSCA1-205ENST00000527920 K7EIM0 57 aa24.94■■□□□ 1.58
SSSCA1-205ENST00000527920 UCP1P25874 307 aa24.94■■□□□ 1.58
SSSCA1-205ENST00000527920 SOSTQ9BQB4 213 aa24.94■■□□□ 1.58
SSSCA1-205ENST00000527920 EDN2P20800 178 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 AKR1C2P52895 323 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 FAAP20Q6NZ36 180 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 UNQ9165/PRO28630Q6UXU0 137 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 OR4C16Q8NGL9 310 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 RCHY1Q96PM5 261 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 TM2D3Q9BRN9 247 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 ZMAT4Q9H898 229 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 UFC1Q9Y3C8 167 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 CEPT1Q9Y6K0 416 aa24.93■■□□□ 1.58
SSSCA1-205ENST00000527920 OR2T8A6NH00 312 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 C8orf88P0DMB2 117 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 MCFD2Q8NI22 146 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 CACNG8Q8WXS5 425 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 PRRT1Q99946 306 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 SLC2A8Q9NY64 477 aa24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 C14orf166Q9Y224 244 aaKnown RBP24.92■■□□□ 1.58
SSSCA1-205ENST00000527920 HUWE1Q7Z6Z7 4374 aaKnown RBP24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 ANKRD20A5PA0PJZ0 165 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 F8W735 103 aaPredicted RBP24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 INS-IGF2F8WCM5 200 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 TNFSF8P32971 234 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 TRIM16LQ309B1 348 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 UXS1Q8NBZ7 420 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 TMEM190Q8WZ59 177 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 PLEKHA3Q9HB20 300 aa24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 GAR1Q9NY12 217 aaKnown RBP24.91■■□□□ 1.58
SSSCA1-205ENST00000527920 A0A0B4J293 547 aa24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 FCGR2BP31994 310 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 CD81P60033 236 aa24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 ZNF57Q68EA5 555 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 RTBDNQ9BSG5 229 aaPredicted RBP24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 TMEM222Q9H0R3 208 aa24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 MRPL27Q9P0M9 148 aaKnown RBP24.9■■□□□ 1.58
SSSCA1-205ENST00000527920 ERHP84090 104 aaKnown RBP24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 IZUMO4Q1ZYL8 232 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 SP6Q3SY56 376 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 TM4SF20Q53R12 229 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 NEURL2Q9BR09 285 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 TUBA4BQ9H853 241 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 MLXQ9UH92 298 aa24.89■■□□□ 1.58
SSSCA1-205ENST00000527920 FABP12A6NFH5 140 aa24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 NDUFA4O00483 81 aa24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 TMEM61Q8N0U2 210 aa24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 RRNAD1Q96FB5 475 aaKnown RBP24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 C5orf66Q9H5L9 145 aa24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 GPR132Q9UNW8 380 aa24.88■■□□□ 1.57
SSSCA1-205ENST00000527920 IGHV3-35A0A0C4DH35 117 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 I3L2K1 104 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 CDS2O95674 445 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 GUCA2BQ16661 112 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 FAM219AQ8IW50 185 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 WDR89Q96FK6 387 aaPredicted RBP24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 TXN2Q99757 166 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 CHRDL1Q9BU40 450 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 NAA60Q9H7X0 242 aa24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 DAZ1Q9NQZ3 744 aaKnown RBP24.87■■□□□ 1.57
SSSCA1-205ENST00000527920 IGHV3-21A0A0B4J1V1 117 aa24.86■■□□□ 1.57
SSSCA1-205ENST00000527920 TRAV25A0A0B4J276 109 aa24.86■■□□□ 1.57
SSSCA1-205ENST00000527920 ADMP35318 185 aa24.86■■□□□ 1.57
SSSCA1-205ENST00000527920 OR51S1Q8NGJ8 323 aa24.86■■□□□ 1.57
SSSCA1-205ENST00000527920 GLYATL2Q8WU03 294 aa24.86■■□□□ 1.57
SSSCA1-205ENST00000527920 TEX13DA0A0J9YY54 714 aaPredicted RBP24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 ST8SIA3O43173 380 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 OR5AC1P0C628 307 aa24.85■■□□□ 1.57
SSSCA1-205ENST00000527920 DHODHQ02127 395 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms