RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 AADACL4Q5VUY2 407 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 SETD6Q8TBK2 473 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 TMEM167AQ8TBQ9 72 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 C5orf30Q96GV9 206 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 NXF2Q9GZY0 626 aaKnown RBP4.42□□□□□ -1.7
VPS26B-204ENST00000527586 ZNF556Q9HAH1 456 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
VPS26B-204ENST00000527586 PAK1IP1Q9NWT1 392 aaPredicted RBP4.42□□□□□ -1.7
VPS26B-204ENST00000527586 CMTM6Q9NX76 183 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 RPH3ALQ9UNE2 315 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 PRELID1Q9Y255 219 aa4.42□□□□□ -1.7
VPS26B-204ENST00000527586 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
VPS26B-204ENST00000527586 TIMM8BQ9Y5J9 83 aaPredicted RBP4.42□□□□□ -1.7
VPS26B-204ENST00000527586 IGLC7A0M8Q6 106 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 K7EIM0 57 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 L7N2F9 121 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 TNFRSF11BO00300 401 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 MRASO14807 208 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 ZNF780AO75290 641 aaPredicted RBP4.41□□□□□ -1.7
VPS26B-204ENST00000527586 NPPAP01160 153 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 HMGN1P05114 100 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 RPSAP08865 295 aaKnown RBP4.41□□□□□ -1.7
VPS26B-204ENST00000527586 ELK1P19419 428 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 RAB3AP20336 220 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 NKX2-1P43699 371 aaPredicted RBP4.41□□□□□ -1.7
VPS26B-204ENST00000527586 IFFO1Q0D2I5 559 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 ARFRP1Q13795 201 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 RBM48Q5RL73 367 aaKnown RBP4.41□□□□□ -1.7
VPS26B-204ENST00000527586 FAM220AQ7Z4H9 259 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 OR51A2Q8NGJ7 313 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 OR13F1Q8NGS4 319 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 OR2G2Q8NGZ5 317 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 IGF2BP2-AS1Q96M15 143 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 OR2D2Q9H210 308 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 SAV1Q9H4B6 383 aaPredicted RBP4.41□□□□□ -1.7
VPS26B-204ENST00000527586 FRRS1LQ9P0K9 344 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 ICOSQ9Y6W8 199 aa4.41□□□□□ -1.7
VPS26B-204ENST00000527586 PGPEP1LA6NFU8 196 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 IBA57-AS1B1ANH7 110 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 NPPCP23582 126 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 TNFSF8P32971 234 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 HMGA2P52926 109 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 MORN5Q5VZ52 161 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 KDM4DQ6B0I6 523 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 PARP16Q8N5Y8 322 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 ERVK13-1Q9NX77 482 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 RDH8Q9NYR8 311 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 KLK11Q9UBX7 282 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 GNG8Q9UK08 70 aa4.4□□□□□ -1.71
VPS26B-204ENST00000527586 GAGE12BA1L429 117 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 NOL3O60936 208 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 FCGR3BO75015 233 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GAGE7O76087 117 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 FABP3P05413 133 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 HLA-GP17693 338 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GATA2P23769 480 aaPredicted RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 DUTP33316 252 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 EIF2B2P49770 351 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 ARPC4P59998 168 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 RPL8P62917 257 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 PPP1R8Q12972 351 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 ZNF79Q15937 498 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 WDR93Q6P2C0 686 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 PUSL1Q8N0Z8 303 aaKnown RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GDPD1Q8N9F7 314 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 MCUR1Q96AQ8 359 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 ADTRPQ96IZ2 230 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GPHA2Q96T91 129 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 NIPSNAP1Q9BPW8 284 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 RIMS4Q9H426 269 aaPredicted RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 ZFAND3Q9H8U3 227 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 CHMP1AQ9HD42 196 aaPredicted RBP4.39□□□□□ -1.71
VPS26B-204ENST00000527586 GID8Q9NWU2 228 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
VPS26B-204ENST00000527586 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 PDCD6O75340 191 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 HTN1P15515 57 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 HTR2CP28335 458 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 ZNF93P35789 620 aaPredicted RBP4.38□□□□□ -1.71
VPS26B-204ENST00000527586 RORCP51449 518 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 MFAP4P55083 255 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 B2MP61769 119 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 TP53I3Q53FA7 332 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 SMUG1Q53HV7 270 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 IGSF11Q5DX21 431 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 OR2B11Q5JQS5 317 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 DDI2Q5TDH0 399 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 ZNF880Q6PDB4 577 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 FOXI2Q6ZQN5 318 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 LINC00612Q8N6U2 182 aa4.38□□□□□ -1.71
VPS26B-204ENST00000527586 OR10W1Q8NGF6 305 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms