RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 UTF1Q5T230 341 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 FGFRL1Q8N441 504 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 DUX3Q96PT4 197 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 FCN3O75636 299 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 OR9G9P0C7N8 305 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 PRR35P0CG20 571 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 DRAM1Q8N682 238 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 ZNRF1Q8ND25 227 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 EEF1AKMT3Q96AZ1 226 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 SERGEFQ9UGK8 458 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 CROCCQ5TZA2 2017 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 IGLV3-10A0A075B6K4 115 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 UBE2CO00762 179 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 IGKV3-20P01619 116 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 NBEAP1P0C6P0 100 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 PSG3Q16557 428 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 OR5P3Q8WZ94 311 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 SF3B5Q9BWJ5 86 aaKnown RBP6.16□□□□□ -1.42
CTNND1-216ENST00000527467 ZFP64Q9NPA5 681 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 TMEM229AB2RXF0 380 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 CD5P06127 495 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 C1orf194Q5T5A4 169 aa6.16□□□□□ -1.42
CTNND1-216ENST00000527467 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
CTNND1-216ENST00000527467 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 VGLL1Q99990 258 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 HIGD1CA8MV81 97 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.42
CTNND1-216ENST00000527467 OR2H2O95918 312 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 P2RY6Q15077 328 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.42
CTNND1-216ENST00000527467 IGHV1-69-2A0A0G2JMI3 117 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 ZIC3O60481 467 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 PGLYRP1O75594 196 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-216ENST00000527467 IFITM2Q01629 132 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 KIR3DS1Q14943 382 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 ZNF658BQ4V348 819 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-216ENST00000527467 TEX45Q8NA69 505 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 FAM57AQ8TBR7 257 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 RCC1LQ96I51 464 aaKnown RBP6.15□□□□□ -1.43
CTNND1-216ENST00000527467 PPP1R3EQ9H7J1 279 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-216ENST00000527467 ZG16O60844 167 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 HAMPP81172 84 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 KLF17Q5JT82 389 aaPredicted RBP6.15□□□□□ -1.43
CTNND1-216ENST00000527467 NPIPB3Q92617 1050 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 TCF19Q9Y242 345 aa6.15□□□□□ -1.43
CTNND1-216ENST00000527467 MUC21A0A0G2JKD1 596 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 MUC21A0A140T8X8 626 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 IQCF6A8MYZ5 107 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 LEPROTO15243 131 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 CD33P20138 364 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 MUC21Q5SSG8 566 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 SMIM20Q8N5G0 67 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 BAALCQ8WXS3 180 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 ASB1Q9Y576 335 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 MYH11P35749 1972 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 CACNA1CQ13936 2221 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 TCRBV5S1A1TA0A578 114 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 MAGEA5P43359 124 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 FBXW9Q5XUX1 488 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 CLEC2AQ6UVW9 174 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 RASL10AQ92737 203 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 HIST1H2BLQ99880 126 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 SS18L2Q9UHA2 77 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 ST6GALNAC2Q9UJ37 374 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 ZNFX1Q9P2E3 1918 aaKnown RBP6.14□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3OR15-7A0A075B7D8 119 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 IL6RP08887 468 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-216ENST00000527467 SYNJ2BPP57105 145 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 C3AR1Q16581 482 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 PIP4P1Q86T03 277 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 COL4A6Q14031 1691 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3-72A0A0B4J1Y9 119 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 A8MXK9 166 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 NPIPB11E5RHQ5 1161 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 DTX2Q86UW9 622 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 PPP1R27Q86WC6 154 aa6.14□□□□□ -1.43
CTNND1-216ENST00000527467 A0A1W2PPI3 338 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 CEACAM5P06731 702 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 SELLP14151 372 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 GTSCR1Q86UQ5 136 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 C1orf174Q8IYL3 243 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 ASCL2Q99929 193 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 PLA2G3Q9NZ20 509 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 IGHV3-64A0A075B6Q5 118 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 A0A1W2PRE2 83 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A10PA6NDY2 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A18PA6NE21 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A16PA6NEW6 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A20PA6NIJ5 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A8PA6NJQ4 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A7PA6NKC0 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A22PA8MWA6 464 aa6.13□□□□□ -1.43
CTNND1-216ENST00000527467 FAM90A12PA8MX19 464 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms