RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 RNF167Q9H6Y7 350 aa11.85□□□□□ -0.51
PTPRU-210ENST00000527027 PLEKHA2Q9HB19 425 aa11.85□□□□□ -0.51
PTPRU-210ENST00000527027 TMEM140Q9NV12 185 aa11.85□□□□□ -0.51
PTPRU-210ENST00000527027 C21orf62Q9NYP8 219 aa11.85□□□□□ -0.51
PTPRU-210ENST00000527027 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 ZNF207O43670 478 aaKnown RBP11.84□□□□□ -0.51
PTPRU-210ENST00000527027 PTHLHP12272 177 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 ZNF182P17025 639 aaPredicted RBP11.84□□□□□ -0.51
PTPRU-210ENST00000527027 NANOS2P60321 138 aaKnown RBP11.84□□□□□ -0.51
PTPRU-210ENST00000527027 MZT2AQ6P582 158 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 CCDC59Q9P031 241 aaKnown RBP11.84□□□□□ -0.51
PTPRU-210ENST00000527027 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 DAPK2Q9UIK4 370 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 ETV7Q9Y603 341 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 PCLOQ9Y6V0 5065 aa11.84□□□□□ -0.51
PTPRU-210ENST00000527027 IGHV3OR16-8A0A075B7F1 116 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 ADMP35318 185 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 MFAP2P55001 183 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 RBMS2Q15434 407 aaKnown RBP11.83□□□□□ -0.52
PTPRU-210ENST00000527027 IDNKQ5T6J7 187 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 OR1L8Q8NGR8 309 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
PTPRU-210ENST00000527027 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
PTPRU-210ENST00000527027 TCTAP57738 103 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 FXYD4P59646 89 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 PRR20EP86478 221 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 PRR20CP86479 221 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 PRR20DP86480 221 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 PRR20BP86481 221 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 PRR20AP86496 221 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 SPCS2Q15005 226 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 ZNF124Q15973 351 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 OR11H2Q8NH07 326 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 OR51H1Q8NH63 302 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 GIMAP1Q8WWP7 306 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 RNF2Q99496 336 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
PTPRU-210ENST00000527027 NDUFA4L2Q9NRX3 87 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 RHBDL2Q9NX52 303 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 COMMD9Q9P000 198 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
PTPRU-210ENST00000527027 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
PTPRU-210ENST00000527027 TRAV18A0A075B6X5 111 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 K7EIM0 57 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 CHEK1O14757 476 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 CTSGP08311 255 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 CLEC2LP0C7M8 214 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 TGFBR1P36897 503 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 Q56UQ5 140 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 AADACL3Q5VUY0 350 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 TMEM116Q8NCL8 245 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 LGALS14Q8TCE9 139 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 DYNC2LI1Q8TCX1 351 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 LSM10Q969L4 123 aaKnown RBP11.81□□□□□ -0.52
PTPRU-210ENST00000527027 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 HINT2Q9BX68 163 aa11.81□□□□□ -0.52
PTPRU-210ENST00000527027 IGHV7-4-1A0A0J9YVY3 117 aa11.8□□□□□ -0.52
PTPRU-210ENST00000527027 TFPI2P48307 235 aa11.8□□□□□ -0.52
PTPRU-210ENST00000527027 ERVK-16P61578 105 aa11.8□□□□□ -0.52
PTPRU-210ENST00000527027 BORCS5Q969J3 196 aa11.8□□□□□ -0.52
PTPRU-210ENST00000527027 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 GNRHRP30968 328 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
PTPRU-210ENST00000527027 TMEM17Q86X19 198 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 CADM3Q8N126 398 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 ZNF414Q96IQ9 312 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 OR10C1Q96KK4 312 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 OR51B2Q9Y5P1 312 aa11.79□□□□□ -0.52
PTPRU-210ENST00000527027 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 IGKV3-7A0A075B6H7 116 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 TRAV14DV4A0A0A6YYC5 116 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 A6NJ64 397 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 NUPL2O15504 423 aaKnown RBP11.78□□□□□ -0.52
PTPRU-210ENST00000527027 SNAPC5O75971 98 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 YIF1AO95070 293 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 FCER2P06734 321 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 F2RP25116 425 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 FAM90A2PQ658T7 463 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 OR5AP2Q8NGF4 316 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
PTPRU-210ENST00000527027 APLNQ9ULZ1 77 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
PTPRU-210ENST00000527027 IGHV3-49A0A0A0MS15 119 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 DEFB4AO15263 64 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
PTPRU-210ENST00000527027 KRASP01116 189 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 LPAR6P43657 344 aa11.77□□□□□ -0.53
PTPRU-210ENST00000527027 PAFAH1B2P68402 229 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms