RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 S100A1P23297 94 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 VAMP1P23763 118 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 SRPXP78539 464 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
SMPD1-202ENST00000526280 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 LGI3Q8N145 548 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 ASB13Q8WXK3 278 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
SMPD1-202ENST00000526280 WDR89Q96FK6 387 aaPredicted RBP10.06□□□□□ -0.8
SMPD1-202ENST00000526280 MS4A10Q96PG2 267 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 ZNF355PQ9NSJ1 428 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
SMPD1-202ENST00000526280 PKD1L1Q8TDX9 2849 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 A0A0B4J2A0 478 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 IGLC7A0M8Q6 106 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 NUDT19A8MXV4 375 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 RBMXL2O75526 392 aaKnown RBP10.05□□□□□ -0.8
SMPD1-202ENST00000526280 TRGV3P03979 118 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 CTRB1P17538 263 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 PSMB6P28072 239 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 TPPP2P59282 170 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 CTRB2Q6GPI1 263 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 Q6ZRM9 215 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 LYG2Q86SG7 212 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 SLC35G3Q8N808 338 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 LRTM2Q8N967 370 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 KLHL30-AS1Q8NEE0 82 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 OR10W1Q8NGF6 305 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 RNASE11Q8TAA1 199 aaKnown RBP10.05□□□□□ -0.8
SMPD1-202ENST00000526280 C4orf3Q8WVX3 66 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 GPR146Q96CH1 333 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 SHPKQ9UHJ6 478 aa10.05□□□□□ -0.8
SMPD1-202ENST00000526280 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 PRH1P02810 166 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 C4BPBP20851 252 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 H2BFSP57053 126 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 HSPE1P61604 102 aaKnown RBP10.04□□□□□ -0.8
SMPD1-202ENST00000526280 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 DHRS2Q13268 280 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 C8orf86Q6ZUL3 223 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 HSD17B13Q7Z5P4 300 aaPredicted RBP10.04□□□□□ -0.8
SMPD1-202ENST00000526280 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 GNB4Q9HAV0 340 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
SMPD1-202ENST00000526280 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 I3L521 148 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 ST8SIA3O43173 380 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 HLA-AP01891 365 aaKnown RBP10.03□□□□□ -0.8
SMPD1-202ENST00000526280 REG1AP05451 166 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 OR13C7P0DN81 318 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 RUNX1Q01196 453 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 NMSQ5H8A3 153 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 C19orf35Q6ZS72 473 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 FANCD2OSQ96PS1 177 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.03□□□□□ -0.8
SMPD1-202ENST00000526280 CACNG5Q9UF02 275 aa10.03□□□□□ -0.8
SMPD1-202ENST00000526280 HMSDA8MTL9 139 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 CXCL2P19875 107 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 HTR2BP41595 481 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 RHOGP84095 191 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 NECAP1Q8NC96 275 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 MITD1Q8WV92 249 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 RAX2Q96IS3 184 aa10.02□□□□□ -0.81
SMPD1-202ENST00000526280 MGAM2Q2M2H8 2515 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 C13orf42A0A1B0GVH6 325 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 L7N2F9 121 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 CCL24O00175 119 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 MPC2O95563 127 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 DUS4LO95620 317 aaKnown RBP10.01□□□□□ -0.81
SMPD1-202ENST00000526280 IFNA17P01571 189 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 LGALS1P09382 135 aaKnown RBP10.01□□□□□ -0.81
SMPD1-202ENST00000526280 DEFA4P12838 97 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 HIST1H1BP16401 226 aaKnown RBP10.01□□□□□ -0.81
SMPD1-202ENST00000526280 MYCNOSP40205 109 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 DEFA5Q01523 94 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 OPCMLQ14982 345 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 DEFB136Q30KP8 78 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 PDLIM3Q53GG5 364 aaPredicted RBP10.01□□□□□ -0.81
SMPD1-202ENST00000526280 TEX261Q6UWH6 196 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 MRPL41Q8IXM3 137 aaKnown RBP10.01□□□□□ -0.81
SMPD1-202ENST00000526280 ZNF680Q8NEM1 530 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 OR52E5Q8NH55 327 aa10.01□□□□□ -0.81
SMPD1-202ENST00000526280 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms