RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-208	ENST00000524533	ANAPC10	Q9UM13	185 aa		12.07	□□□□□ -0.48
HIF3A-208	ENST00000524533	KIR2DL5B	A0A0G2JN68	375 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	KIR2DL5B	A0A0G2JPC4	375 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533		F8W735	103 aa	Predicted RBP	12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533		K7EIM0	57 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	ZNF207	O43670	478 aa	Known RBP	12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	ADM	P35318	185 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	TGFBR1	P36897	503 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	TAS2R20	P59543	309 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	KIR2DL5A	Q8N109	375 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	KIR2DL5B	Q8NHK3	375 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	TMEM56	Q96MV1	263 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533	PRND	Q9UKY0	176 aa		12.06	□□□□□ -0.48
HIF3A-208	ENST00000524533		K7EMT4	169 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	GPR31	O00270	319 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	CTSD	P07339	412 aa	Predicted RBP	12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	RPL35A	P18077	110 aa	Known RBP	12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	CADM3	Q8N126	398 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	SAMD12	Q8N8I0	201 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	OR5B3	Q8NH48	314 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	RNF183	Q96D59	192 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	GALNT14	Q96FL9	552 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	FKBP11	Q9NYL4	201 aa		12.05	□□□□□ -0.48
HIF3A-208	ENST00000524533	C15orf61	A6NNL5	157 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	C15orf62	A8K5M9	175 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	NAT1	P18440	290 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	REL	Q04864	619 aa	Predicted RBP	12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	KCTD21	Q4G0X4	260 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	OR6F1	Q8NGZ6	308 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	TSC22D3	Q99576	134 aa		12.04	□□□□□ -0.48
HIF3A-208	ENST00000524533	DBX1	A6NMT0	343 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	ATF4	P18848	351 aa	Predicted RBP	12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	PRSS3	P35030	304 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	HRH1	P35367	487 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	TMEM217	Q8N7C4	229 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	OR1P1	Q8NH06	330 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	MAP6D1	Q9H9H5	199 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	TMEM14B	Q9NUH8	114 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	SMPX	Q9UHP9	88 aa		12.03	□□□□□ -0.48
HIF3A-208	ENST00000524533	IGHV7-4-1	A0A0J9YVY3	117 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	NUPL2	O15504	423 aa	Known RBP	12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	CTSG	P08311	255 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	HLA-DMA	P28067	261 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	S100G	P29377	79 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	RPS19	P39019	145 aa	Known RBP	12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	PHLDA2	Q53GA4	152 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	APRG1	Q8IVJ8	170 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	MISP3	Q96FF7	219 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	RNF2	Q99496	336 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	RHPN1-AS1	Q9BWJ2	59 aa		12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	KLK5	Q9Y337	293 aa	Predicted RBP	12.02	□□□□□ -0.49
HIF3A-208	ENST00000524533	CHEK1	O14757	476 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	YIF1A	O95070	293 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	FCGR2B	P31994	310 aa	Predicted RBP	12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	MFAP4	P55083	255 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	TSPAN5	P62079	268 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	LSM3	P62310	102 aa	Known RBP	12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	LPCAT3	Q6P1A2	487 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	TBC1D26	Q86UD7	250 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	TMEM116	Q8NCL8	245 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	SLC25A46	Q96AG3	418 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	ZNF414	Q96IQ9	312 aa		12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.01	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGHV3-49	A0A0A0MS15	119 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533		I3L2K1	104 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	TFPI2	P48307	235 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	ZNF124	Q15973	351 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	H2BFWT	Q7Z2G1	175 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	LYSMD2	Q8IV50	215 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	OR4A16	Q8NH70	328 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	SEC22A	Q96IW7	307 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	OR10C1	Q96KK4	312 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	TXN2	Q99757	166 aa		12	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGKV3-7	A0A075B6H7	116 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	MT-CO2	P00403	227 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	EIF4E	P06730	217 aa	Known RBP	11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	CMC4	P56277	68 aa	Predicted RBP	11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	PRCD	Q00LT1	54 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	ZNF114	Q8NC26	417 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	GPX8	Q8TED1	209 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	CMTM3	Q96MX0	182 aa		11.99	□□□□□ -0.49
HIF3A-208	ENST00000524533	TRAV14DV4	A0A0A6YYC5	116 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	GNG7	O60262	68 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGKV1-39	P01597	117 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGHV3-48	P01763	117 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGKV1D-39	P04432	117 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	GATAD1	Q8WUU5	269 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	MRGPRF	Q96AM1	343 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	PINX1	Q96BK5	328 aa	Known RBP	11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	YIPF6	Q96EC8	236 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	NXF2	Q9GZY0	626 aa	Known RBP	11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	CSTL1	Q9H114	145 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	VCX3A	Q9NNX9	186 aa		11.98	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGHV3OR16-13	A0A075B7E8	117 aa		11.97	□□□□□ -0.49
HIF3A-208	ENST00000524533	IGHV3-74	A0A0B4J1X5	117 aa		11.97	□□□□□ -0.49
HIF3A-208	ENST00000524533	MPTX1	A8MV57	137 aa		11.97	□□□□□ -0.49
HIF3A-208	ENST00000524533	RCVRN	P35243	200 aa		11.97	□□□□□ -0.49
HIF3A-208	ENST00000524533	SNX29P2	Q8IUI4	249 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms