RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 HLA-DQB1P01920 261 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 CD74P04233 296 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 AHSA2Q719I0 299 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 C10orf67Q8IYJ2 551 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 SPAG16Q8N0X2 631 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 DGCR14Q96DF8 476 aaKnown RBP6.7□□□□□ -1.34
PTPN12-216ENST00000523952 ATG101Q9BSB4 218 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 MND1Q9BWT6 205 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 KRTAP4-7Q9BYR0 210 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 X6R8D5 127 aa6.7□□□□□ -1.34
PTPN12-216ENST00000523952 TMEM272A0A1B0GTI8 110 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 METTL21EPA6NDL7 271 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 UPK2O00526 184 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 ARL6IP5O75915 188 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 UCHL1P09936 223 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 HTN3P15516 51 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 NQO2P16083 231 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
PTPN12-216ENST00000523952 EMP1P54849 157 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 TAS2R31P59538 309 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 ERVK-16P61578 105 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 TNP2Q05952 138 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 CATR1Q13166 79 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 RCN1Q15293 331 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 ACTL10Q5JWF8 245 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 HES5Q5TA89 166 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 UBE2UQ5VVX9 321 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 ZNF367Q7RTV3 350 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
PTPN12-216ENST00000523952 NANOGP1Q8N7R0 232 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 STXBP6Q8NFX7 210 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 FAM210BQ96KR6 192 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 GPHA2Q96T91 129 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 SCRT1Q9BWW7 348 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 KCNK7Q9Y2U2 307 aa6.69□□□□□ -1.34
PTPN12-216ENST00000523952 F11RQ9Y624 299 aaKnown RBP6.69□□□□□ -1.34
PTPN12-216ENST00000523952 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 IGKV1D-13A0A0B4J2D9 117 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 IGHV3-66A0A0C4DH42 116 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 MFNGO00587 321 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 GNG7O60262 68 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 HPRT1P00492 218 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 CTSGP08311 255 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 IGKV1-13P0DP09 117 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 CD37P11049 281 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 C4BPBP20851 252 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 MFAP4P55083 255 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 NUTF2P61970 127 aaKnown RBP6.68□□□□□ -1.34
PTPN12-216ENST00000523952 ARL6IP1Q15041 203 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 FAM90A2PQ658T7 463 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 Q6ZS49 121 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 OR1L8Q8NGR8 309 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 SECTM1Q8WVN6 248 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 ST8SIA2Q92186 375 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 LSM10Q969L4 123 aaKnown RBP6.68□□□□□ -1.34
PTPN12-216ENST00000523952 TMEM203Q969S6 136 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 MISP3Q96FF7 219 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 ZNF414Q96IQ9 312 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 OR10C1Q96KK4 312 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 TMEM56Q96MV1 263 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 CCDC90BQ9GZT6 254 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 TMEM140Q9NV12 185 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 V9GY05 133 aa6.68□□□□□ -1.34
PTPN12-216ENST00000523952 IGKV1D-8A0A087WSZ0 117 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 A0A1W2PS18 150 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 KNCNA6PVL3 124 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 SULT1C2O00338 296 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 SNAPC5O75971 98 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 IGLV2-14P01704 120 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 INAFM2P0DMQ5 153 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 DTYMKP23919 212 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 CALRP27797 417 aaKnown RBP6.67□□□□□ -1.34
PTPN12-216ENST00000523952 ARPC4P59998 168 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 CNIH2Q6PI25 160 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 ZNF773Q6PK81 442 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 C6orf223Q8N319 242 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 FAM24BQ8N5W8 94 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 BPIFB6Q8NFQ5 453 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 UFD1Q92890 307 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 SLC25A46Q96AG3 418 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 NARS2Q96I59 477 aaKnown RBP6.67□□□□□ -1.34
PTPN12-216ENST00000523952 GFI1Q99684 422 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 ATG5Q9H1Y0 275 aa6.67□□□□□ -1.34
PTPN12-216ENST00000523952 TEX48A0A1B0GUV7 120 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 TMEM189A5PLL7 270 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 K7EIM0 57 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 RBFOX2O43251 390 aaKnown RBP eCLIP6.66□□□□□ -1.345e-18■□□□□ 9.6
PTPN12-216ENST00000523952 GIG44P09565 113 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-216ENST00000523952 EIF2B2P49770 351 aaKnown RBP6.66□□□□□ -1.34
PTPN12-216ENST00000523952 BRWD1-AS2P59051 145 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 SPHARQ15513 63 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 TRAM1Q15629 374 aa6.66□□□□□ -1.34
PTPN12-216ENST00000523952 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms