RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 SLC25A42Q86VD7 318 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 TMEM17Q86X19 198 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 OR6F1Q8NGZ6 308 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 RFESDQ8TAC1 157 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 MRPL30Q8TCC3 161 aaKnown RBP4.93□□□□□ -1.62
SDCBP-210ENST00000522843 RTN4IP1Q8WWV3 396 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-210ENST00000522843 MRGPRFQ96AM1 343 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 ELOVL1Q9BW60 279 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 SRD5A3Q9H8P0 318 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 IFT46Q9NQC8 304 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 MCUBQ9NWR8 336 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 IDI2-AS1Q9NZ38 188 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 OR6C3Q9NZP0 311 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-210ENST00000522843 TRBV6-7A0A0A0MS04 114 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 TRAV39A0A0B4J263 110 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 A0A0B4J2A0 478 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 MSGN1A6NI15 193 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 CNIH1O95406 144 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 GAPDHP04406 335 aaKnown RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 SSTR5P35346 364 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR3A3P47888 321 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 CD81P60033 236 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 MRPS15P82914 257 aaKnown RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 KLF5Q13887 457 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 MSMO1Q15800 293 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 RSBN1Q5VWQ0 802 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 TRAT1Q6PIZ9 186 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 C16orf54Q6UWD8 224 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 LYG2Q86SG7 212 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR8H1Q8NGG4 311 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR4A4PQ8NGN8 299 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR5H2Q8NGV7 314 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 OR10X1Q8NGY0 326 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 PHLDA1Q8WV24 401 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 ASB13Q8WXK3 278 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 FLYWCH2Q96CP2 140 aaKnown RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 CABLES2Q9BTV7 478 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 C20orf85Q9H1P6 137 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 PARP11Q9NR21 331 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 NUDT15Q9NV35 164 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 SHPKQ9UHJ6 478 aa4.92□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF230Q9UIE0 474 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-210ENST00000522843 A0A1W2PN81 502 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 TMEM30CPA0ZSE6 113 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 MEIS3P1A6NDR6 274 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ITGB1BP1O14713 200 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 SLC31A2O15432 143 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 FABP7O15540 132 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 PFDN1O60925 122 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 SNAPC5O75971 98 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 OR2A4O95047 310 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 HLA-DRB1P01911 266 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 PMP2P02689 132 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 CTSDP07339 412 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 GSTT2P0CG29 244 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF44P15621 663 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ZBTB25P24278 435 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 CHRNA7P36544 502 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 GLP1RP43220 463 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 FAM3BP58499 235 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 RRAS2P62070 204 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 HTD2P86397 168 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 HMGN3Q15651 99 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ECSCRQ19T08 205 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 PAN3Q58A45 887 aaKnown RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 TMEM128Q5BJH2 165 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 LPCAT3Q6P1A2 487 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 PLPPR1Q8TBJ4 325 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ZFAND1Q8TCF1 268 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 CCDC107Q8WV48 283 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 MOB3AQ96BX8 217 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF486Q96H40 463 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 OR2A7Q96R45 310 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 GINS4Q9BRT9 223 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 RTBDNQ9BSG5 229 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 HDHD3Q9BSH5 251 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 C5orf66Q9H5L9 145 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 GPN1Q9HCN4 374 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-210ENST00000522843 KIF25Q9UIL4 384 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 FLVCR2Q9UPI3 526 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 GAB2Q9UQC2 676 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 ALG5Q9Y673 324 aa4.91□□□□□ -1.62
SDCBP-210ENST00000522843 TRAV6A0A075B6T7 132 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 IGKV1-6A0A0C4DH72 117 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 OR5H14A6NHG9 310 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 OR11H12B2RN74 326 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 C15orf65H3BRN8 121 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 ARPC1BO15143 372 aaKnown RBP4.9□□□□□ -1.63
SDCBP-210ENST00000522843 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 SCTP09683 121 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 OR4E1P0C645 316 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 SULT1A3P0DMM9 295 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 SULT1A4P0DMN0 295 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms