RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 OPN1MW2P0DN77 364 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 OPN1MW3P0DN78 364 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 NQO2P16083 231 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 RND3P61587 244 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 EWSR1Q01844 656 aaKnown RBP eCLIP9.9□□□□□ -0.82
PABPC1-219ENST00000522387 CLINT1Q14677 625 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 MMDQ15546 238 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 LFNGQ8NES3 379 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 PIFOQ8TCI5 191 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 EAF1Q96JC9 268 aaPredicted RBP9.9□□□□□ -0.82
PABPC1-219ENST00000522387 TCEAL7Q9BRU2 100 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 TMED3Q9Y3Q3 217 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 RFNGQ9Y644 331 aa9.9□□□□□ -0.82
PABPC1-219ENST00000522387 MARCH11A6NNE9 402 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 SLC25A17O43808 307 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 CDS2O95674 445 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM11P17152 192 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 OR2B8PP59922 312 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 OR4C13Q8NGP0 309 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 OR4S2Q8NH73 311 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 CDC42EP3Q9UKI2 254 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 A0A1B0GW64 132 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 FAM24AA6NFZ4 105 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 TXNL1O43396 289 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 SSSCA1O60232 199 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 OR8U8P0C7N1 319 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 BRS3P32247 399 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 ADTRPQ96IZ2 230 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 RHOVQ96L33 236 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 RARRES2Q99969 163 aa9.89□□□□□ -0.83
PABPC1-219ENST00000522387 PUS1Q9Y606 427 aaKnown RBP eCLIP9.89□□□□□ -0.83
PABPC1-219ENST00000522387 TRAV3A0A0B4J244 114 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 RBMXL2O75526 392 aaKnown RBP9.88□□□□□ -0.83
PABPC1-219ENST00000522387 MOSP00540 346 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 APELAP0DMC3 54 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 MYOD1P15172 320 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 UCP1P25874 307 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 MC5RP33032 325 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 PLGLAQ15195 96 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 FAM71F2Q6NXP2 309 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 OR2C3Q8N628 320 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 OR2G3Q8NGZ4 309 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 R3HDM4Q96D70 268 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 MEGF9Q9H1U4 602 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 FBXL15Q9H469 300 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM56-RWDD3S4R434 201 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 IGSF23A1L1A6 192 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 H3BP45 60 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 AP4M1O00189 453 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 CLN5O75503 358 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 HPRT1P00492 218 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 SAA1P0DJI8 122 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-219ENST00000522387 IER3P46695 156 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 LRRC75BQ2VPJ9 315 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 Q6ZRM9 215 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 PDPNQ86YL7 162 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 C11orf1Q9H5F2 150 aa9.88□□□□□ -0.83
PABPC1-219ENST00000522387 OR2C1O95371 312 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 IFNA17P01571 189 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 IGKV1-5P01602 117 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 ATP6V0CP27449 155 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 CD1BP29016 333 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 NKX2-1P43699 371 aaPredicted RBP9.87□□□□□ -0.83
PABPC1-219ENST00000522387 GNB1P62873 340 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 CCL20P78556 96 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 ZNF266Q14584 549 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 SPINK9Q5DT21 86 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 OR2T10Q8NGZ9 312 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 ATRQ13535 2644 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 RBFOX3A6NFN3 312 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 FCN1O00602 326 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 PITX3O75364 302 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM50AO95807 157 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 MAS1LP35410 378 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 BPIFB3P59826 476 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 SRPXP78539 464 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 NMSQ5H8A3 153 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 Q6YL49 198 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM217Q8N7C4 229 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 OR51M1Q9H341 326 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 SMDT1Q9H4I9 107 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 ESM1Q9NQ30 184 aa9.87□□□□□ -0.83
PABPC1-219ENST00000522387 ZMAT5Q9UDW3 170 aaKnown RBP9.87□□□□□ -0.83
PABPC1-219ENST00000522387 OOSP1A8MZH6 123 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 CST7O76096 145 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 MSMO1Q15800 293 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 C9orf152Q5JTZ5 239 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 OR4A47Q6IF82 309 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 SLC25A33Q9BSK2 321 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 TMEM140Q9NV12 185 aa9.86□□□□□ -0.83
PABPC1-219ENST00000522387 CHST1O43916 411 aa9.85□□□□□ -0.83
PABPC1-219ENST00000522387 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
PABPC1-219ENST00000522387 OR9G9P0C7N8 305 aa9.85□□□□□ -0.83
PABPC1-219ENST00000522387 VDAC1P21796 283 aa9.85□□□□□ -0.83
PABPC1-219ENST00000522387 S100PP25815 95 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms