RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 BSCL2Q96G97 398 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-208ENST00000521605 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
MRPS28-208ENST00000521605 SSBP3Q9BWW4 388 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-208ENST00000521605 PRDM13Q9H4Q3 707 aa8.68□□□□□ -1.02
MRPS28-208ENST00000521605 WASHC3Q9Y3C0 194 aa8.68□□□□□ -1.02
MRPS28-208ENST00000521605 KPTNQ9Y664 436 aa8.68□□□□□ -1.02
MRPS28-208ENST00000521605 MEX3AA1L020 520 aaKnown RBP8.67□□□□□ -1.02
MRPS28-208ENST00000521605 PMS2P5A8MQ11 134 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 ZNF705EA8MWA4 302 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-208ENST00000521605 LY6LH3BQJ8 138 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 CST7O76096 145 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 BTNL8Q6UX41 500 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 Q6ZSV7 163 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 C11orf44Q8N8P7 122 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 LFNGQ8NES3 379 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 TMEM167AQ8TBQ9 72 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 SSMEM1Q8WWF3 244 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 FLYWCH2Q96CP2 140 aaKnown RBP8.67□□□□□ -1.02
MRPS28-208ENST00000521605 CXorf58Q96LI9 332 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 TMEM147Q9BVK8 224 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 MRPL20Q9BYC9 149 aaKnown RBP8.67□□□□□ -1.02
MRPS28-208ENST00000521605 SMIM3Q9BZL3 60 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
MRPS28-208ENST00000521605 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
MRPS28-208ENST00000521605 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 IGHV2-70DA0A0C4DH43 119 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 A0A1B0GW64 132 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 CEBPZOSA8MTT3 80 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 C22orf46C9J442 243 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 ENSAO43768 121 aaKnown RBP8.66□□□□□ -1.02
MRPS28-208ENST00000521605 MPDU1O75352 247 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 KBTBD11O94819 623 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 ZP3P21754 424 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 ATP6V0CP27449 155 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 CEACAM3P40198 252 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 LINC00205P59089 165 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 RPL15P61313 204 aaKnown RBP8.66□□□□□ -1.02
MRPS28-208ENST00000521605 PRCDQ00LT1 54 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 PAX2Q02962 417 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 SLC38A11Q08AI6 406 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 HABP2Q14520 560 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-208ENST00000521605 OR10P1Q8NGE3 313 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 OR4C12Q96R67 309 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 QTRT1Q9BXR0 403 aaKnown RBP8.66□□□□□ -1.02
MRPS28-208ENST00000521605 TCF19Q9Y242 345 aa8.66□□□□□ -1.02
MRPS28-208ENST00000521605 SACSQ9NZJ4 4579 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 ODF3BA8MYP8 253 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 SHOXO15266 292 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 NDUFS6O75380 124 aaKnown RBP8.65□□□□□ -1.02
MRPS28-208ENST00000521605 RBMXL2O75526 392 aaKnown RBP8.65□□□□□ -1.02
MRPS28-208ENST00000521605 TSPAN9O75954 239 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 IFNA17P01571 189 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 IGHV3-7P01780 117 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 IGKV1-16P04430 117 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 METTL15P1P0C7V9 234 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 IAPPP10997 89 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 MAS1LP35410 378 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 RAB11AP62491 216 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 PJVKQ0ZLH3 352 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 PMS2P11Q13670 270 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 CLINT1Q14677 625 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 BSXQ3C1V8 233 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 TOR2AQ5JU69 321 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 MINOS1Q5TGZ0 78 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 Q8N7P7 452 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 TEX45Q8NA69 505 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 OR4P4Q8NGL7 312 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
MRPS28-208ENST00000521605 MINOS1-NBL1R4GNA1 71 aa8.65□□□□□ -1.02
MRPS28-208ENST00000521605 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 H3BP45 60 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 FBXO24O75426 580 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 MBP02144 154 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 CD1BP29016 333 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 RPL8P62917 257 aaKnown RBP8.64□□□□□ -1.03
MRPS28-208ENST00000521605 DLK1P80370 383 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 ARL16Q0P5N6 197 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 MRPL41Q8IXM3 137 aaKnown RBP8.64□□□□□ -1.03
MRPS28-208ENST00000521605 LILRB2Q8N423 598 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM217Q8N7C4 229 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 HARBI1Q96MB7 349 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 SRSF8Q9BRL6 282 aaKnown RBP8.64□□□□□ -1.03
MRPS28-208ENST00000521605 UQCC1Q9NVA1 299 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 DPM3Q9P2X0 92 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
MRPS28-208ENST00000521605 DOCK11Q5JSL3 2073 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 IGHV1-3A0A0C4DH29 117 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 A0A1W2PN81 502 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms