RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 MRPL30Q8TCC3 161 aaKnown RBP0.77□□□□□ -2.29
PCM1-214ENST00000521338 IMP4Q96G21 291 aaKnown RBP0.77□□□□□ -2.29
PCM1-214ENST00000521338 DERL1Q9BUN8 251 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 TP73-AS1Q9UF72 201 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 BAIAP2Q9UQB8 552 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 PKIGQ9Y2B9 76 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 LAMB2P55268 1798 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 STRCQ7RTU9 1775 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 KIF13BQ9NQT8 1826 aa0.77□□□□□ -2.29
PCM1-214ENST00000521338 WRNQ14191 1432 aaPredicted RBP eCLIP0.76□□□□□ -2.29
PCM1-214ENST00000521338 IGKV1D-43A0A0B4J1Z2 117 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 TRAPPC13A5PLN9 417 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 SDCBPO00560 298 aaPredicted RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 CHP2O43745 196 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 LYPLA2O95372 231 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 IGKV1-5P01602 117 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HLA-DRB1P01911 266 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 LYNX1P0DP58 116 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H1TP22492 207 aaPredicted RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BOP23527 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BBP33778 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 RPL5P46777 297 aaKnown RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 ZNF80P51504 273 aaPredicted RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BDP58876 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 PSME3P61289 254 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 SNRPD2P62316 118 aaKnown RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BCP62807 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 ITGB3BPQ13352 177 aaPredicted RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST2H2BEQ16778 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 RPS19BP1Q86WX3 136 aaKnown RBP0.76□□□□□ -2.29
PCM1-214ENST00000521338 ZNF439Q8NDP4 499 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 OR8J2Q8NGG1 315 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 RASSF5Q8WWW0 418 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BHQ93079 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 PPP1R2P1Q96PQ5 205 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 OR52E6Q96RD3 313 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BNQ99877 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HIST1H2BMQ99879 126 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 CYSTM1Q9H1C7 97 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 FBXL12Q9NXK8 326 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 LHFPL6Q9Y693 200 aa0.76□□□□□ -2.29
PCM1-214ENST00000521338 HECW2Q9P2P5 1572 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 SETD5Q9C0A6 1442 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 MTUS2Q5JR59 1369 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 TONSLQ96HA7 1378 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 TTC21AQ8NDW8 1320 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 INTS1Q8N201 2190 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 FAAHO00519 579 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 MRPS14O60783 128 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 PMP2P02689 132 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 ANGP03950 147 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 CLPSP04118 112 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 RPS17P08708 135 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 METTL15P1P0C7V9 234 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 UBBP0CG47 229 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 HBA1P69905 142 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 RUNX1Q01196 453 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 ZNF345Q14585 488 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 CDK5R1Q15078 307 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 KCNJ8Q15842 424 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 ACOT6Q3I5F7 207 aaPredicted RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 RPL22L1Q6P5R6 122 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 DCXRQ7Z4W1 244 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 C20orf196Q8IYI0 205 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 LRRC25Q8N386 305 aaPredicted RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 MCFD2Q8NI22 146 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 C11orf40Q8WZ69 217 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 CCDC42Q96M95 316 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 ADAT1Q9BUB4 502 aaKnown RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 COMMD5Q9GZQ3 224 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 PRTFDC1Q9NRG1 225 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 VPS29Q9UBQ0 182 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 V9GYY5 206 aaPredicted RBP0.75□□□□□ -2.29
PCM1-214ENST00000521338 HECW1Q76N89 1606 aa0.75□□□□□ -2.29
PCM1-214ENST00000521338 IGKV3D-7A0A0C4DH55 119 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 IGKV3OR2-268A0A0C4DH90 116 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 DPRXA6NFQ7 191 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 CLDN24A6NM45 220 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 TMEM212A6NML5 194 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 SERPINA6P08185 405 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 CEBPGP53567 150 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 DEFA1P59665 94 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 MYL6P60660 151 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 RPS20P60866 119 aaKnown RBP0.74□□□□□ -2.29
PCM1-214ENST00000521338 STX5Q13190 355 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 SPANXN3Q5MJ09 141 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 SPOPLQ6IQ16 392 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 LPCAT3Q6P1A2 487 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 LCN15Q6UWW0 184 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 UNQ6190/PRO20217Q6UXQ8 127 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 AAED1Q7RTV5 226 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 BPIFA4PQ86YQ2 179 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 TRAPPC5Q8IUR0 188 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 Q8N2B8 174 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 ANKRD29Q8N6D5 301 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 CLDN22Q8N7P3 220 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 C15orf53Q8NAA6 179 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 WFDC11Q8NEX6 87 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 OR13C4Q8NGS5 318 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms