RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 A0A1W2PN81 502 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 CEBPZOSA8MTT3 80 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 H0YIZ8 118 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 SYNGR2O43760 224 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 SSSCA1O60232 199 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 IAPPP10997 89 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 PPIFP30405 207 aaKnown RBP11.97□□□□□ -0.49
LSM1-203ENST00000520755 CHRNA7P36544 502 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 PAX9P55771 341 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 CD83Q01151 205 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 BSXQ3C1V8 233 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 Q5BKY6 102 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 OR2C3Q8N628 320 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 ST6GAL2Q96JF0 529 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 CITED2Q99967 270 aaPredicted RBP11.97□□□□□ -0.49
LSM1-203ENST00000520755 SRSF8Q9BRL6 282 aaKnown RBP11.97□□□□□ -0.49
LSM1-203ENST00000520755 LSM5Q9Y4Y9 91 aaKnown RBP11.97□□□□□ -0.49
LSM1-203ENST00000520755 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
LSM1-203ENST00000520755 NPIPB5A8MRT5 1133 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 OR13C7P0DN81 318 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 CTRB1P17538 263 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 PSMB6P28072 239 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 MFAP2P55001 183 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 S100A10P60903 97 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 AKIRIN2Q53H80 203 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 TCTEX1D4Q5JR98 221 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 TEX38Q6PEX7 206 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 LCNL1Q6ZST4 164 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 COMMD1Q8N668 190 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 FAM110DQ8TAY7 271 aaPredicted RBP11.96□□□□□ -0.49
LSM1-203ENST00000520755 RANGRFQ9HD47 186 aaPredicted RBP11.96□□□□□ -0.49
LSM1-203ENST00000520755 OR5AC2Q9NZP5 309 aa11.96□□□□□ -0.49
LSM1-203ENST00000520755 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 WRBO00258 174 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 MED6O75586 246 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 MPC2O95563 127 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 IGHG4P01861 327 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 CRYGCP07315 174 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
LSM1-203ENST00000520755 PF4V1P10720 104 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 RAP2BP61225 183 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 CYCSP99999 105 aaKnown RBP11.95□□□□□ -0.5
LSM1-203ENST00000520755 CD300CQ08708 224 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 ZNF114Q8NC26 417 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 OR5T1Q8NG75 326 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 ASB13Q8WXK3 278 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 OR4C12Q96R67 309 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 P2RX4Q99571 388 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 CACFD1Q9UGQ2 172 aa11.95□□□□□ -0.5
LSM1-203ENST00000520755 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 H3BP45 60 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 SMLR1H3BR10 107 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 DEDDO75618 318 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 PRH1P02810 166 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 DEFA5Q01523 94 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 FOXE3Q13461 319 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
LSM1-203ENST00000520755 RNF126Q9BV68 326 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 ZNF355PQ9NSJ1 428 aa11.94□□□□□ -0.5
LSM1-203ENST00000520755 F11RQ9Y624 299 aaKnown RBP11.94□□□□□ -0.5
LSM1-203ENST00000520755 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 IGLV1-40P01703 118 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 RPLP1P05386 114 aaKnown RBP11.93□□□□□ -0.5
LSM1-203ENST00000520755 ELANEP08246 267 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 LYL1P12980 280 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 KLK9Q2XQG4 91 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 TMEM65Q6PI78 240 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 OR2T35Q8NGX2 323 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 RAB40CQ96S21 281 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 ENY2Q9NPA8 101 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 HEYLQ9NQ87 328 aaPredicted RBP11.93□□□□□ -0.5
LSM1-203ENST00000520755 MBD2Q9UBB5 411 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 KLK9Q9UKQ9 250 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 ANK2Q01484 3957 aa11.93□□□□□ -0.5
LSM1-203ENST00000520755 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 CCNKO75909 580 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 PSMB8P28062 276 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
LSM1-203ENST00000520755 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 NDUFA11Q86Y39 141 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 CIB3Q96Q77 187 aaPredicted RBP11.92□□□□□ -0.5
LSM1-203ENST00000520755 NEURL2Q9BR09 285 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
LSM1-203ENST00000520755 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
LSM1-203ENST00000520755 TSC22D2O75157 780 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 NPY1RP25929 384 aa11.91□□□□□ -0.5
LSM1-203ENST00000520755 HTR2BP41595 481 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms