RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 RAB11BQ15907 218 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 BSXQ3C1V8 233 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 ACOT6Q3I5F7 207 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 C2orf83Q53S99 150 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SPATA46Q5T0L3 261 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM225Q6GV28 225 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 CBLN3Q6UW01 205 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 DPPA3Q6W0C5 159 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 Q6ZSR3 168 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM220AQ7Z4H9 259 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 C1orf174Q8IYL3 243 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SAXO1Q8IYX7 474 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM256Q8N2U0 113 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MUC15Q8N387 334 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR51A4Q8NGJ6 313 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR5D18Q8NGL1 313 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR13C9Q8NGT0 318 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR6N2Q8NGY6 317 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR13G1Q8NGZ3 307 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR8S1Q8NH09 359 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR10G6Q8NH81 332 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MFSD8Q8NHS3 518 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 PLPPR1Q8TBJ4 325 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MARCH1Q8TCQ1 289 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 CD300LFQ8TDQ1 290 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SLC37A2Q8TED4 501 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 RPUSD4Q96CM3 377 aaKnown RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 RASD2Q96D21 266 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 SMIM12Q96EX1 92 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 IMMP1LQ96LU5 166 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TBX15Q96SF7 602 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 CITED1Q99966 193 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 NIPSNAP3BQ9BS92 247 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TBL1XR1Q9BZK7 514 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR11A1Q9GZK7 315 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 TCEAL2Q9H3H9 227 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 ELOVL3Q9HB03 270 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR2S2Q9NQN1 319 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 GPR84Q9NQS5 396 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 RFNGQ9Y644 331 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 WSB1Q9Y6I7 421 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 URGCP-MRPS24S4R325 110 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 KIAA1549Q9HCM3 1950 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
HMGB1P41-201ENST00000520234 RP1P56715 2156 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMED7-TICAM2A0A0A6YYA0 188 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 LOC100131303A0A0U1RQF7 123 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 A0A1B0GUS0 222 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLC7A0M8Q6 106 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM14DPA8MWL7 114 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 G3V4G9 280 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 H7BYZ3 331 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CORTO00230 105 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 FCN1O00602 326 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TAX1BP3O14907 124 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 HYPMO75409 117 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 MAS1P04201 325 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PET100P0DJ07 73 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CTSEP14091 401 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGLL1P15814 213 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 KITLGP21583 273 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 MDKP21741 143 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 VDAC1P21796 283 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CCL1P22362 96 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TSPOP30536 169 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 HRH1P35367 487 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 NPBWR2P48146 333 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CSNK1A1P48729 337 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 LHX2P50458 406 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF133P52736 654 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 EMP2P54851 167 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PPP1CAP62136 330 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PAFAH1B2P68402 229 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 HTD2P86397 168 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ENDOGQ14249 297 aaKnown RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 IGFBP7Q16270 282 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TAF9Q16594 264 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 HIST3H3Q16695 136 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 C5orf64Q2M2E5 130 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 SMIM21Q3B7S5 101 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 TMEM41BQ5BJD5 291 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 LRRC10Q5BKY1 277 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 LDLRAD2Q5SZI1 272 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 C1orf140Q5VVS0 124 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 FAM71F2Q6NXP2 309 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF880Q6PDB4 577 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 WDR74Q6RFH5 385 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 UNQ5815/PRO19632Q6UWF5 114 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF705AQ6ZN79 300 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 CYP2G1PQ6ZSU1 146 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 Q6ZVH6 145 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 DPY19L4Q7Z388 723 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 NEGR1Q7Z3B1 354 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 PNKDQ8N490 385 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF676Q8N7Q3 588 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 ZNF738Q8NE65 137 aa2.26□□□□□ -2.05
HMGB1P41-201ENST00000520234 OR4B1Q8NGF8 309 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms