RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 HTR2BP41595 481 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 ATP5IP56385 69 aaPredicted RBP11.1□□□□□ -0.63
SDC2-203ENST00000519587 VAMP2P63027 116 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 WT1-ASQ06250 92 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 SRSF4Q08170 494 aaKnown RBP11.1□□□□□ -0.63
SDC2-203ENST00000519587 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 OR2C3Q8N628 320 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 LSM5Q9Y4Y9 91 aaKnown RBP11.1□□□□□ -0.63
SDC2-203ENST00000519587 CUBNO60494 3623 aa11.1□□□□□ -0.63
SDC2-203ENST00000519587 K7EPK0 472 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 FBXO24O75426 580 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 IGHG4P01861 327 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 REG1AP05451 166 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 CRYGCP07315 174 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 IAPPP10997 89 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 HIST1H1BP16401 226 aaKnown RBP11.09□□□□□ -0.63
SDC2-203ENST00000519587 CTRB1P17538 263 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
SDC2-203ENST00000519587 POLR2GP62487 172 aaKnown RBP eCLIP11.09□□□□□ -0.63
SDC2-203ENST00000519587 CFHR3Q02985 330 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 FGL1Q08830 312 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 FOXE3Q13461 319 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 CTRB2Q6GPI1 263 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 TMEM65Q6PI78 240 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.635e-6■■□□□ 11.4
SDC2-203ENST00000519587 C19orf24Q9BVV8 132 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
SDC2-203ENST00000519587 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
SDC2-203ENST00000519587 IFNA10P01566 189 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 ELANEP08246 267 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 PF4V1P10720 104 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 NPY1RP25929 384 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 BCAP31P51572 246 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 PROK1P58294 105 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 TAS2R30P59541 319 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 RPL23AP62750 156 aaKnown RBP11.08□□□□□ -0.64
SDC2-203ENST00000519587 IL15RAQ13261 267 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 RAB32Q13637 225 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 PPP1R1CQ8WVI7 109 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 THYN1Q9P016 225 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 F11RQ9Y624 299 aaKnown RBP11.08□□□□□ -0.64
SDC2-203ENST00000519587 U3KQ87 197 aa11.08□□□□□ -0.64
SDC2-203ENST00000519587 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 CORTO00230 105 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 SCAF4O95104 1147 aaKnown RBP11.07□□□□□ -0.64
SDC2-203ENST00000519587 BRI3O95415 125 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
SDC2-203ENST00000519587 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 OR5AU1Q8NGC0 362 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
SDC2-203ENST00000519587 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
SDC2-203ENST00000519587 TSC22D2O75157 780 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 DEDDO75618 318 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 TRGV3P03979 118 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 OR8U8P0C7N1 319 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 RNASE2P10153 161 aaKnown RBP11.06□□□□□ -0.64
SDC2-203ENST00000519587 TPPP2P59282 170 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 RAB11AP62491 216 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 CD83Q01151 205 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 BSXQ3C1V8 233 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 C2orf83Q53S99 150 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 AKAP14Q86UN6 197 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 NECAP1Q8NC96 275 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 THAP6Q8TBB0 222 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 CHAC2Q8WUX2 184 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 P2RX4Q99571 388 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 PSENENQ9NZ42 101 aa11.06□□□□□ -0.64
SDC2-203ENST00000519587 PAIP2BQ9ULR5 123 aaKnown RBP11.06□□□□□ -0.64
SDC2-203ENST00000519587 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 E5RGE8 158 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 SOX15O60248 233 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 MPC2O95563 127 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 PSMB8P28062 276 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 RHOGP84095 191 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
SDC2-203ENST00000519587 SPANXN5Q5MJ07 72 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 PRSS54Q6PEW0 395 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 OR2T35Q8NGX2 323 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
SDC2-203ENST00000519587 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
SDC2-203ENST00000519587 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
SDC2-203ENST00000519587 A0A1B0GVG6 124 aa11.04□□□□□ -0.64
SDC2-203ENST00000519587 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms