RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 NDUFB6O95139 128 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 HOXD3P31249 432 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 BTCP35070 178 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 SRPXP78539 464 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 PRCDQ00LT1 54 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 EXOSC2Q13868 293 aaKnown RBP15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 GPR146Q96CH1 333 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 CACFD1Q9UGQ2 172 aa15.71■□□□□ 0.11
TNFRSF10B-204ENST00000519028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ST8SIA3O43173 380 aa15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 MFAP2P55001 183 aa15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 UBE2MP61081 183 aaKnown RBP15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 OR1L6Q8NGR2 347 aa15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 GPR61Q9BZJ8 451 aa15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 WDR12Q9GZL7 423 aaKnown RBP15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 THYN1Q9P016 225 aa15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 F11RQ9Y624 299 aaKnown RBP15.7■□□□□ 0.1
TNFRSF10B-204ENST00000519028 INS-IGF2F8WCM5 200 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 OVOL1O14753 267 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 WIPF1O43516 503 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ZP3P21754 424 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 MECP2P51608 486 aaKnown RBP15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 KLF5Q13887 457 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 AARDQ4LEZ3 155 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 LGI3Q8N145 548 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CENPSQ8N2Z9 138 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 OR2C3Q8N628 320 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SLC35G3Q8N808 338 aa15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 RNASE11Q8TAA1 199 aaKnown RBP15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF10B-204ENST00000519028 A0A0B4J2A0 478 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SEC14L6B5MCN3 397 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 EGFEM1PQ0D2K5 195 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ZNF846Q147U1 533 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SPINK9Q5DT21 86 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SLC25A24Q6NUK1 477 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 LYZL2Q7Z4W2 148 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 OR52E5Q8NH55 327 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SHPKQ9UHJ6 478 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 FLVCR2Q9UPI3 526 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 S4R3C0 116 aa15.68■□□□□ 0.1
TNFRSF10B-204ENST00000519028 DUXBA0A1W2PPF3 345 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 BMPR1BO00238 502 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 LYRM1O43325 122 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 IFNA17P01571 189 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 IGHV3-23P01764 117 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 KRTAP10-11P60412 298 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ERHP84090 104 aaKnown RBP15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PPP1R1AQ13522 171 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 C9orf66Q5T8R8 295 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 LRTM2Q8N967 370 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 EEF1AKMT3Q96AZ1 226 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CXorf58Q96LI9 332 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CCDC140Q96MF4 163 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PDCD10Q9BUL8 212 aa15.67■□□□□ 0.1
TNFRSF10B-204ENST00000519028 DNAH3Q8TD57 4116 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 MFSD2BA6NFX1 497 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SFT2D2O95562 160 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PRB2P02812 416 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ANKRD55Q3KP44 614 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 NMSQ5H8A3 153 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ACSM6Q6P461 480 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ZNF114Q8NC26 417 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 OR1P1Q8NH06 330 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PLEKHA3Q9HB20 300 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CACNG5Q9UF02 275 aa15.66■□□□□ 0.1
TNFRSF10B-204ENST00000519028 TRBV7-1A0A0A6YYK4 115 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PPP5D1E7EU14 171 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 VAMP1P23763 118 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 SPCS3P61009 180 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 RPEL1Q2QD12 228 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 PDLIM3Q53GG5 364 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CLEC19AQ6UXS0 136 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 ZNF502Q8TBZ5 544 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 VN1R17PQ8TDU5 208 aa15.65■□□□□ 0.1
TNFRSF10B-204ENST00000519028 CLEC3BP05452 202 aa15.64■□□□□ 0.09
TNFRSF10B-204ENST00000519028 INSL3P51460 131 aa15.64■□□□□ 0.09
TNFRSF10B-204ENST00000519028 ATP6V0BQ99437 205 aa15.64■□□□□ 0.09
TNFRSF10B-204ENST00000519028 SULT1A3P0DMM9 295 aa15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 SULT1A4P0DMN0 295 aa15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 SYNJ2BPP57105 145 aa15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 SCARB1Q8WTV0 552 aa15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 AURKAIP1Q9NWT8 199 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 ZMAT5Q9UDW3 170 aaKnown RBP15.63■□□□□ 0.09
TNFRSF10B-204ENST00000519028 A0A1B0GU03 582 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 C9orf170A2RU37 121 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 K7EIM0 57 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 GGCTO75223 188 aaKnown RBP15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 UPK1BO75841 260 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 OR2C1O95371 312 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 HLA-AP01891 365 aaKnown RBP15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 OR4E1P0C645 316 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 SLC25A6P12236 298 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 TATDN3Q17R31 274 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 MZT2BQ6NZ67 158 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 IL34Q6ZMJ4 242 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 OR9G4Q8NGQ1 327 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 TBC1D24Q9ULP9 559 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 TMED3Q9Y3Q3 217 aa15.62■□□□□ 0.09
TNFRSF10B-204ENST00000519028 IGHV3-21A0A0B4J1V1 117 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms