RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OR7C2O60412 319 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 OR2H2O95918 312 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 NRASP01111 189 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 HLA-DRB1P01911 266 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 BGLAPP02818 100 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 CECR9P0C854 216 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SCGB1C2P0DMR2 95 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 CTLA4P16410 223 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 FGF7P21781 194 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 EVX1P49640 407 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TAS2R46P59540 309 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 GRB2P62993 217 aaKnown RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 REG3AQ06141 175 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 ADIGQ0VDE8 80 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SHHQ15465 462 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 UBE2SQ16763 222 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 RSPO1Q2MKA7 263 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 DEFB116Q30KQ4 102 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 CENPWQ5EE01 88 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TEX261Q6UWH6 196 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF767PQ75MW2 155 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TCF23Q7RTU1 214 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM86AQ8N2M4 240 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 C12orf45Q8N5I9 185 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM229BQ8NBD8 167 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 OR8B12Q8NGG6 310 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 OR13C8Q8NGS7 320 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 OR10J6PQ8NGY7 276 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 OR5W2Q8NH69 310 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SCGB1C1Q8TD33 95 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SFT2D1Q8WV19 159 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 APOBEC3DQ96AK3 386 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM159Q96B96 161 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 ADAT3Q96EY9 351 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 FAM19A4Q96LR4 140 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 THTPAQ9BU02 230 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SMIM3Q9BZL3 60 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 PARP12Q9H0J9 701 aaKnown RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 CACYBPQ9HB71 228 aaKnown RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 POPDC3Q9HBV1 291 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM100Q9NV29 134 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SCP2D1Q9UJQ7 156 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 COL4A4P53420 1690 aaPredicted RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SLIT3O75094 1523 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 ARFGEF2Q9Y6D5 1785 aa2.2□□□□□ -2.06
VPS13B-207ENST00000518569 PHF3Q92576 2039 aaKnown RBP2.2□□□□□ -2.06
VPS13B-207ENST00000518569 SPATA31E1Q6ZUB1 1445 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TRBV19A0A075B6N1 114 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 A0A087WUU8 490 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TRAV8-3A0A0A6YYJ7 113 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 IGHV1-69-2A0A0G2JMI3 117 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 FAM236DA0A1B0GTK5 79 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 PNMA8CA0A1B0GUJ8 204 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SMIM31A0A1B0GVY4 71 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TMEM269A0A1B0GVZ9 245 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 DUXBA0A1W2PPF3 345 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 KRBOX1C9JBD0 128 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 C11orf94C9JXX5 98 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 H3BP45 60 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 UPK1AO00322 258 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SLC37A4O43826 429 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 DPM2O94777 84 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 IGHMP01871 453 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 OPN1SWP03999 348 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 APODP05090 189 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ADRA2AP08913 450 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 UCHL1P09936 223 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 FAM236CP0DP71 79 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 FGF6P10767 208 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 CPMP14384 443 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 BLVRBP30043 206 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 PRSS3P35030 304 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 GNG4P50150 75 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 RAB5CP51148 216 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 POLR2HP52434 150 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ZNF136P52737 540 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 TAS2R20P59543 309 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 UBE2NP61088 152 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 MAXP61244 160 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 RPS21P63220 83 aaKnown RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 EIF4EBP1Q13541 118 aaPredicted RBP2.19□□□□□ -2.06
VPS13B-207ENST00000518569 MMDQ15546 238 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 C12orf74Q32Q52 190 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 FBXL19-AS1Q494R0 122 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 COL5A1-AS1Q5SY13 56 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 LYRM7Q5U5X0 104 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SPATA31B1PQ5VZV4 182 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 LCN8Q6JVE9 175 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 PRSS54Q6PEW0 395 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 ALKAL1Q6UXT8 129 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 GTF2H5Q6ZYL4 71 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 SLC25A45Q8N413 288 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 MMGT1Q8N4V1 131 aa2.19□□□□□ -2.06
VPS13B-207ENST00000518569 LY6G5BQ8NDX9 201 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms