RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 A8MWP6 167 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 M0QYG6 137 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 IFNA6P05013 189 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 EDN2P20800 178 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 GPR183P32249 361 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 ZNF57Q68EA5 555 aaPredicted RBP7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 UXS1Q8NBZ7 420 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 DYNC2LI1Q8TCX1 351 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 C15orf40Q8WUR7 153 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 S100ZQ8WXG8 99 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 MARC2Q969Z3 335 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 TMEM56Q96MV1 263 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 ATP6V0BQ99437 205 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 WDR12Q9GZL7 423 aaKnown RBP7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 EDA2RQ9HAV5 297 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 F11RQ9Y624 299 aaKnown RBP7.96□□□□□ -1.14
PDGFRB-203ENST00000517660 TGOLN2O43493 480 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 CD7P09564 240 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 C8orf88P0DMB2 117 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 PGAM2P15259 253 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 TBPP20226 339 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 ELLP55199 621 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 ZNF846Q147U1 533 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 TM4SF20Q53R12 229 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 RNASE12Q5GAN4 147 aaKnown RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 RNASE10Q5GAN6 216 aaKnown RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 UNQ9165/PRO28630Q6UXU0 137 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 LINC00322Q6ZN03 302 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 LINC00299Q6ZSB3 139 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 H2BFWTQ7Z2G1 175 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 OR52I2Q8NH67 350 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 OR4A16Q8NH70 328 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 MCFD2Q8NI22 146 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 CACNG8Q8WXS5 425 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 ZNF486Q96H40 463 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 SEC22AQ96IW7 307 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 ZNF436Q9C0F3 470 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 PLEKHA3Q9HB20 300 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 TMEM14BQ9NUH8 114 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 C21orf62Q9NYP8 219 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 CCDC59Q9P031 241 aaKnown RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 MRPL27Q9P0M9 148 aaKnown RBP7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 KLK11Q9UBX7 282 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 MTFP1Q9UDX5 166 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 UFC1Q9Y3C8 167 aa7.95□□□□□ -1.14
PDGFRB-203ENST00000517660 TRAV25A0A0B4J276 109 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 C15orf61A6NNL5 157 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 OR11H12B2RN74 326 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 IGKV1-39P01597 117 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 CD3DP04234 171 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 IGKV1D-39P04432 117 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 MFAP2P55001 183 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 RND3P61587 244 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 SPSB3Q6PJ21 355 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 SLC16A13Q7RTY0 426 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 LHFPL1Q86WI0 220 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 TMEM61Q8N0U2 210 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 ARRDC1Q8N5I2 433 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 DEFB125Q8N687 156 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 OR1P1Q8NH06 330 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 SCARB1Q8WTV0 552 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 BSCL2Q96G97 398 aaPredicted RBP7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 ABHD1Q96SE0 405 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 MLXQ9UH92 298 aa7.94□□□□□ -1.14
PDGFRB-203ENST00000517660 IGHV3-21A0A0B4J1V1 117 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 IGHV3-35A0A0C4DH35 117 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 OR2T8A6NH00 312 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 K7EIM0 57 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 NDUFA4O00483 81 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 HSPE1P61604 102 aaKnown RBP7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 BTNL8Q6UX41 500 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 RBPMS2Q6ZRY4 209 aaKnown RBP7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 OR2C3Q8N628 320 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 TMEM229BQ8NBD8 167 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 TERB2Q8NHR7 220 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 ZFAND1Q8TCF1 268 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 SLIRPQ9GZT3 109 aaKnown RBP7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 C6orf62Q9GZU0 229 aaPredicted RBP7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 SRD5A3Q9H8P0 318 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 SELENOKQ9Y6D0 94 aa7.93□□□□□ -1.14
PDGFRB-203ENST00000517660 GABARAPH6UMI1 98 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 CTDSP2O14595 271 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 RGS5O15539 181 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 ATG12O94817 140 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 SCAF4O95104 1147 aaKnown RBP7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 RAB3DO95716 219 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 CD74P04233 296 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 PI3P19957 117 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 S100A5P33763 92 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 PIGPP57054 158 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 TAS2R19P59542 299 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 MRPS10P82664 201 aaKnown RBP7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 ERHP84090 104 aaKnown RBP7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 PRCDQ00LT1 54 aa7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 SSBP1Q04837 148 aaKnown RBP7.92□□□□□ -1.14
PDGFRB-203ENST00000517660 Q56UQ5 140 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms