RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 OR4D2P58180 307 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 NAA20P61599 178 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 RSU1Q15404 277 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 C1orf195Q5TG92 126 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 C7orf65Q6ZTY9 151 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 DEFB125Q8N687 156 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 OR1M1Q8NGA1 313 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 ANKRD7Q92527 254 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 TESCQ96BS2 214 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 CXorf21Q9HAI6 301 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 NAT8Q9UHE5 227 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 MUC3AQ02505 3323 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 NYNRINQ9P2P1 1898 aaKnown RBP0.88□□□□□ -2.27
SKP1-203ENST00000517625 DSCAMO60469 2012 aa0.88□□□□□ -2.27
SKP1-203ENST00000517625 AKAP13Q12802 2813 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 MXRA5Q9NR99 2828 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 RIF1Q5UIP0 2472 aaKnown RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 TRBV10-2A0A0K0K1G8 114 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 C21orf140B9A014 251 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 SLC22A1O15245 554 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 CRPP02741 224 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 REG1AP05451 166 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 LYNX1P0DP58 116 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 PRB4P10163 310 aaPredicted RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 CCR7P32248 378 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 AP2S1P53680 142 aaPredicted RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 RPL18Q07020 188 aaKnown RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 MOGQ16653 247 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 ARHGAP11BQ3KRB8 267 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 IBA57Q5T440 356 aaKnown RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 CD200R1LQ6Q8B3 271 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 FP248Q71RG6 208 aaPredicted RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 GID4Q8IVV7 300 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 C10orf67Q8IYJ2 551 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 ZNF676Q8N7Q3 588 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 OR8B3Q8NGG8 313 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 LLPHQ9BRT6 129 aaKnown RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 KRTAP4-1Q9BYQ7 146 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 LSM5Q9Y4Y9 91 aaKnown RBP0.87□□□□□ -2.27
SKP1-203ENST00000517625 KMT2DO14686 5537 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 SCN9AQ15858 1988 aa0.87□□□□□ -2.27
SKP1-203ENST00000517625 TENM2Q9NT68 2774 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 FLT4P35916 1363 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 IGKV3-7A0A075B6H7 116 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 I3L521 148 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 ORC5O43913 435 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 OR5G3P0C626 314 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 TRGC1P0CF51 173 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 AQP4P55087 323 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 IFITM2Q01629 132 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 COTL1Q14019 142 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 HIST3H3Q16695 136 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 LPCAT4Q643R3 524 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 DHFR2Q86XF0 187 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 CNBD2Q96M20 576 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 ERMAPQ96PL5 475 aaPredicted RBP0.86□□□□□ -2.27
SKP1-203ENST00000517625 FUT9Q9Y231 359 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 TIMM22Q9Y584 194 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 KDM5CP41229 1560 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 SMARCA4P51532 1647 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 NHSL1Q5SYE7 1610 aa0.86□□□□□ -2.27
SKP1-203ENST00000517625 TEX15Q9BXT5 2789 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 KDM5AP29375 1690 aaKnown RBP0.85□□□□□ -2.27
SKP1-203ENST00000517625 CELSR1Q9NYQ6 3014 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 SDCBPO00560 298 aaPredicted RBP0.85□□□□□ -2.27
SKP1-203ENST00000517625 IGHV3-7P01780 117 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 PPBPP02775 128 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 RPS12P25398 132 aaKnown RBP0.85□□□□□ -2.27
SKP1-203ENST00000517625 G6PCP35575 357 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 CCL20P78556 96 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 STX5Q13190 355 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 SFXN4Q6P4A7 337 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 C1orf158Q8N1D5 194 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 C9orf163Q8N9P6 203 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 C11orf40Q8WZ69 217 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 YIPF3Q9GZM5 350 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 PAQR5Q9NXK6 330 aaPredicted RBP0.85□□□□□ -2.27
SKP1-203ENST00000517625 LHFPL6Q9Y693 200 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 TPRP12270 2363 aaKnown RBP0.85□□□□□ -2.27
SKP1-203ENST00000517625 CHD5Q8TDI0 1954 aa0.85□□□□□ -2.27
SKP1-203ENST00000517625 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 EIF4G1Q04637 1599 aaKnown RBP0.84□□□□□ -2.27
SKP1-203ENST00000517625 IGKV1D-43A0A0B4J1Z2 117 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 FABP5P3A8MUU1 101 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 IBA57-AS1B1ANH7 110 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 KCNK1O00180 336 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 PRM2P04554 102 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 HLA-DMBP28068 263 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 MAP2K4P45985 399 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 ZNF80P51504 273 aaPredicted RBP0.84□□□□□ -2.27
SKP1-203ENST00000517625 COQ5Q5HYK3 327 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 FAM27BQ5VT28 67 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 SYPL2Q5VXT5 272 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 PTH2Q96A98 100 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 OR52E6Q96RD3 313 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 ADAT1Q9BUB4 502 aaKnown RBP0.84□□□□□ -2.27
SKP1-203ENST00000517625 MRPS26Q9BYN8 205 aaKnown RBP0.84□□□□□ -2.27
SKP1-203ENST00000517625 OR8D2Q9GZM6 311 aa0.84□□□□□ -2.27
SKP1-203ENST00000517625 EFCAB1Q9HAE3 211 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms