RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 ZNF556Q9HAH1 456 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 MAGEL2Q9UJ55 1249 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 NSG2Q9Y328 171 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 LRRC42Q9Y546 428 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 GMEB1Q9Y692 573 aa1.15□□□□□ -2.23
RNU6-548P-201ENST00000517083 IGHV3-64A0A075B6Q5 118 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 IGHV3-21A0A0B4J1V1 117 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 RIIAD1A6NNX1 92 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 FAM90A26D6RGX4 464 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 FFAR1O14842 300 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 PRAF2O60831 178 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ZNF254O75437 659 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 GPX5O75715 221 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 CRYZL1O95825 349 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 APOHP02749 345 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ORM1P02763 201 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 MT-ND4P03905 459 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 PRM2P04554 102 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ALPLP05186 524 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 HNRNPCP07910 306 aaKnown RBP eCLIP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SAA1P0DJI8 122 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 PSKH1P11801 424 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 AREGP15514 252 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SPI1P17947 270 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 RCC1P18754 421 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ELK1P19419 428 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 AZU1P20160 251 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 UCP1P25874 307 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 NUDT2P50583 147 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 CAV1Q03135 178 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 GAMTQ14353 236 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ZNF846Q147U1 533 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ZSCAN26Q16670 478 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SPINK13Q1W4C9 94 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ODF4Q2M2E3 257 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 MAJINQ3KP22 176 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 PIGYQ3MUY2 71 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 CYBRD1Q53TN4 286 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 YIF1BQ5BJH7 314 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SPINK9Q5DT21 86 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SAMD4BQ5PRF9 694 aaKnown RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 RBM48Q5RL73 367 aaKnown RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 LY6G6FQ5SQ64 297 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 GDF5OSQ5U4N7 250 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 FAM78BQ5VT40 261 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 KCNIP4Q6PIL6 250 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 DEGS2Q6QHC5 323 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 TBPL2Q6SJ96 375 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SH2D6Q7Z4S9 175 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 GPR141Q7Z602 305 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 CDH26Q8IXH8 852 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 OFCC1Q8IZS5 231 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ZNF781Q8N8C0 355 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 TMEM75Q8N9X5 138 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ZNF383Q8NA42 475 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 CCDC54Q8NEL0 328 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 OTOSQ8NHW6 89 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 OSR1Q8TAX0 266 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 TAMM41Q96BW9 452 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 C7orf34Q96L11 122 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 C9orf85Q96MD7 179 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ARPC5LQ9BPX5 153 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SLC25A39Q9BZJ4 359 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 RIMS4Q9H426 269 aaPredicted RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 ISG20L2Q9H9L3 353 aaKnown RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 SPACA1Q9HBV2 294 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 PLAC8Q9NZF1 115 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 Q9UF83 564 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 OR52A1Q9UKL2 312 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 MGAT4AQ9UM21 535 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 HHLA3Q9XRX5 114 aa1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 RBM7Q9Y580 266 aaKnown RBP1.14□□□□□ -2.23
RNU6-548P-201ENST00000517083 TRGV1A0A0A0MS02 117 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IGKV2-24A0A0C4DH68 120 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IGKV1-12A0A0C4DH73 117 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 PLAC8L1A1L4L8 177 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 TEX22C9J3V5 150 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 K7EQD1 137 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 M0R2Z0 102 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 RAB27BO00194 218 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 SULT1C2O00338 296 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 COPEO14579 308 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 FCGR3BO75015 233 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 CA11O75493 328 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 SRSF10O75494 262 aaKnown RBP1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 ATG12O94817 140 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 BPNT1O95861 308 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IGHV3-53P01767 116 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 HLA-DQA1P01909 254 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 TTRP02766 147 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 MT-ND6P03923 174 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IDO1P14902 403 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 ATF1P18846 271 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 KRT4P19013 534 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IL12AP29459 219 aa1.13□□□□□ -2.23
RNU6-548P-201ENST00000517083 IFNGR2P38484 337 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms