RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
TRIM41-209ENST00000515834 PHLDA1Q8WV24 401 aaPredicted RBP9.27□□□□□ -0.93
TRIM41-209ENST00000515834 VKORC1Q9BQB6 163 aa9.27□□□□□ -0.93
TRIM41-209ENST00000515834 SEC16AO15027 2179 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 HBBP68871 147 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 APCDD1LQ8NCL9 501 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 SMIM8Q96KF7 97 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 MRPL16Q9NX20 251 aaKnown RBP9.26□□□□□ -0.93
TRIM41-209ENST00000515834 OR11H12B2RN74 326 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 ATP5LO75964 103 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 POC1AQ8NBT0 407 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 OR11H1Q8NG94 326 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 IGHV3-73A0A0B4J1V6 119 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 DSCR9P59020 149 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 PLA2G10O15496 165 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 SMIM10L1P0DMW3 83 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 SMIM10Q96HG1 83 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 AKAP6Q13023 2319 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 UMODP07911 640 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 OR52E5Q8NH55 327 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 ZNF414Q96IQ9 312 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 SPTA1P02549 2419 aa9.26□□□□□ -0.93
TRIM41-209ENST00000515834 A0A0U1RRA0 63 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 LOC390937A0A1W2PQ73 354 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 IGHMP01871 453 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 TFF3Q07654 80 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 BRD3OSQ6XYD6 125 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 ZDBF2Q9HCK1 2354 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 CD300CQ08708 224 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 ZNF345Q14585 488 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 TXNDC17Q9BRA2 123 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 SPRR3Q9UBC9 169 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 SCN4AP35499 1836 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 IGHV3-53P01767 116 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 SOD3P08294 240 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 MEF2CQ06413 473 aaPredicted RBP9.25□□□□□ -0.93
TRIM41-209ENST00000515834 VMO1Q7Z5L0 202 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 Q9H3A6 140 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 C5orf66Q9H5L9 145 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
TRIM41-209ENST00000515834 HLA-DQB1P01920 261 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 GZMMP51124 257 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 PKIAP61925 76 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 KLRD1Q13241 179 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 IRF3Q14653 427 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 TMEM187Q14656 261 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 GATAD1Q8WUU5 269 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 A0A087WX48 190 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 ZP1P60852 638 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 TRAF4Q9BUZ4 470 aaPredicted RBP9.25□□□□□ -0.93
TRIM41-209ENST00000515834 COL11A1P12107 1806 aaPredicted RBP9.25□□□□□ -0.93
TRIM41-209ENST00000515834 SNAI2O43623 268 aa9.25□□□□□ -0.93
TRIM41-209ENST00000515834 PPIFP30405 207 aaKnown RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 FER1L6-AS1Q8NA97 138 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 A0A1B0GV72 72 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 APOHP02749 345 aaPredicted RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 VCX2Q9H322 139 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 TRIOBPQ9H2D6 2365 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 CXCL2P19875 107 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 TMEM133Q9H2Q1 129 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 MRPS18AQ9NVS2 196 aaKnown RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 SAA2-SAA4A0A096LPE2 208 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 GREM1O60565 184 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 APOMO95445 188 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 TMEM50AO95807 157 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 SAA2P0DJI9 122 aaPredicted RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 EGR4Q05215 589 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 STPG2Q8N412 459 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 DIDO1Q9BTC0 2240 aaKnown RBP9.24□□□□□ -0.93
TRIM41-209ENST00000515834 UBR3Q6ZT12 1888 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 TIMM23O14925 209 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
TRIM41-209ENST00000515834 J3QW42 95 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 K7ERU9 68 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 KLHL30-AS1Q8NEE0 82 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 ABCA7Q8IZY2 2146 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 COL18A1P39060 1754 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 LHFPL4Q7Z7J7 247 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 IQCF6A8MYZ5 107 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 C1QTNF9BB2RNN3 333 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 C1orf100Q5SVJ3 147 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 MAPK1IP1LQ8NDC0 245 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 OR1P1Q8NH06 330 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 PAX8Q06710 450 aa9.23□□□□□ -0.93
TRIM41-209ENST00000515834 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms