RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 LY86O95711 162 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 CSN3P07498 182 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 GP9P14770 177 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 SPNP16150 400 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 ETV6P41212 452 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 HSPE1P61604 102 aaKnown RBP9.74□□□□□ -0.85
CLCN3-210ENST00000515420 PRCDQ00LT1 54 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 DHODHQ02127 395 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 TRIM63Q969Q1 353 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 HINT2Q9BX68 163 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 NDUFA13Q9P0J0 144 aa9.74□□□□□ -0.85
CLCN3-210ENST00000515420 TEX13DA0A0J9YY54 714 aaPredicted RBP9.73□□□□□ -0.85
CLCN3-210ENST00000515420 CRYM-AS1A6NIL9 109 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 A8MWP6 167 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 PPP5D1E7EU14 171 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 CDS2O95674 445 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 IGKV1-5P01602 117 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 MECP2P51608 486 aaKnown RBP9.73□□□□□ -0.85
CLCN3-210ENST00000515420 CD69Q07108 199 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 ZNF79Q15937 498 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 FAM106AQ4KMX7 169 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 PYDC2Q56P42 97 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 SPANXN2Q5MJ10 180 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 LCN12Q6JVE5 192 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 Q8N402 240 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 OR2C3Q8N628 320 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 GLYATL2Q8WU03 294 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 RBPMSQ93062 196 aaKnown RBP9.73□□□□□ -0.85
CLCN3-210ENST00000515420 RRNAD1Q96FB5 475 aaKnown RBP9.73□□□□□ -0.85
CLCN3-210ENST00000515420 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 NAA60Q9H7X0 242 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 SMAD5-AS1Q9Y6J3 95 aa9.73□□□□□ -0.85
CLCN3-210ENST00000515420 CLEC3BP05452 202 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 KLF9Q13886 244 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-210ENST00000515420 SP6Q3SY56 376 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 AARDQ4LEZ3 155 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 TOMM5Q8N4H5 51 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 IL22RA2Q969J5 263 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 BSCL2Q96G97 398 aaPredicted RBP9.72□□□□□ -0.85
CLCN3-210ENST00000515420 PLEKHA3Q9HB20 300 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 MCUBQ9NWR8 336 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
CLCN3-210ENST00000515420 COL7A1Q02388 2944 aa9.72□□□□□ -0.85
CLCN3-210ENST00000515420 A0A0B4J293 547 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 PIGBOS1A0A0B4J2F0 54 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 OR2C1O95371 312 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 IGHV3-23P01764 117 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 NHLRC4P0CG21 123 aaPredicted RBP9.71□□□□□ -0.86
CLCN3-210ENST00000515420 FCGR2BP31994 310 aaPredicted RBP9.71□□□□□ -0.86
CLCN3-210ENST00000515420 MFAP2P55001 183 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 ERHP84090 104 aaKnown RBP9.71□□□□□ -0.86
CLCN3-210ENST00000515420 SLC35G3Q8N808 338 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 PDCD10Q9BUL8 212 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 TECRQ9NZ01 308 aaKnown RBP9.71□□□□□ -0.86
CLCN3-210ENST00000515420 CACFD1Q9UGQ2 172 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 KCNIP3Q9Y2W7 256 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 S4R3C0 116 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 TMEM56-RWDD3S4R434 201 aa9.71□□□□□ -0.86
CLCN3-210ENST00000515420 C2orf70A6NJV1 201 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 K7EIM0 57 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 TGOLN2O43493 480 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 HLA-AP01891 365 aaKnown RBP9.7□□□□□ -0.86
CLCN3-210ENST00000515420 GPR183P32249 361 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
CLCN3-210ENST00000515420 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 OR52E5Q8NH55 327 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
CLCN3-210ENST00000515420 TMEM230Q96A57 120 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 TXN2Q99757 166 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 ZNF436Q9C0F3 470 aaPredicted RBP9.7□□□□□ -0.86
CLCN3-210ENST00000515420 PALMDQ9NP74 551 aa9.7□□□□□ -0.86
CLCN3-210ENST00000515420 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 A8MZ25 164 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 ST8SIA3O43173 380 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 IFNA17P01571 189 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 FOLR2P14207 255 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 SRPXP78539 464 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 TMEM187Q14656 261 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 IZUMO4Q1ZYL8 232 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 ADAMTSL5Q6ZMM2 481 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 HAPLN4Q86UW8 402 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 SELENOHQ8IZQ5 122 aaKnown RBP9.69□□□□□ -0.86
CLCN3-210ENST00000515420 LHFPL5Q8TAF8 219 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 MARC2Q969Z3 335 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
CLCN3-210ENST00000515420 SRRQ9GZT4 340 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 ZC4H2Q9NQZ6 224 aa9.69□□□□□ -0.86
CLCN3-210ENST00000515420 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.69□□□□□ -0.86
CLCN3-210ENST00000515420 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
CLCN3-210ENST00000515420 F8W735 103 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms