RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ETV6P41212 452 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 AKR1C2P52895 323 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 MRPS10P82664 201 aaKnown RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 MEF2DQ14814 521 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 GUCA2BQ16661 112 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 FAM106AQ4KMX7 169 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 PLET1Q6UQ28 207 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 Q6ZRM9 215 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 GPHB5Q86YW7 130 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 UXS1Q8NBZ7 420 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 LHFPL5Q8TAF8 219 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 SCARB1Q8WTV0 552 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 CXorf58Q96LI9 332 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 TMEM56Q96MV1 263 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 TSC22D3Q99576 134 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 SRSF8Q9BRL6 282 aaKnown RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 THAP7Q9BT49 309 aaPredicted RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 NXF2Q9GZY0 626 aaKnown RBP8.69□□□□□ -1.02
VCAN-212ENST00000515397 C5orf66Q9H5L9 145 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 MCUBQ9NWR8 336 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 FKBP11Q9NYL4 201 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 U3KQK5 164 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
VCAN-212ENST00000515397 TEX13DA0A0J9YY54 714 aaPredicted RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 ANKRD20A5PA0PJZ0 165 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 TMEM213A2RRL7 107 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 ST8SIA3O43173 380 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 GSTZ1O43708 216 aaPredicted RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 CD7P09564 240 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 P0C879 139 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 CBLN1P23435 193 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 HSPE1P61604 102 aaKnown RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 PYDC2Q56P42 97 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 Q56UQ5 140 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 OR2C3Q8N628 320 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 CCDC71LQ8N9Z2 235 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 PINX1Q96BK5 328 aaKnown RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 FAM212BQ9NTI7 297 aaPredicted RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 C21orf62Q9NYP8 219 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 SIGLEC8Q9NYZ4 499 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 THYN1Q9P016 225 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 MLXQ9UH92 298 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 RSL24D1Q9UHA3 163 aaKnown RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
VCAN-212ENST00000515397 C14orf166Q9Y224 244 aaKnown RBP8.68□□□□□ -1.02
VCAN-212ENST00000515397 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 TGOLN2O43493 480 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 SCAF4O95104 1147 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 IFNA17P01571 189 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 FGF2P09038 288 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 PRCDQ00LT1 54 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 FAM209BQ5JX69 171 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 THOC7Q6I9Y2 204 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 LCN12Q6JVE5 192 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 SELENOHQ8IZQ5 122 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 CADM3Q8N126 398 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 Q8N402 240 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 RNASE11Q8TAA1 199 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 VN1R17PQ8TDU5 208 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 GLYATL2Q8WU03 294 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 RBM38Q9H0Z9 239 aaKnown RBP8.67□□□□□ -1.02
VCAN-212ENST00000515397 NAA60Q9H7X0 242 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 PLEKHA3Q9HB20 300 aa8.67□□□□□ -1.02
VCAN-212ENST00000515397 LGALS9O00182 355 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 CYB5BO43169 146 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 NXPH3O95157 252 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 MT-CO2P00403 227 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 AKR1C4P17516 323 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 UCP1P25874 307 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 ADMP35318 185 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 CD81P60033 236 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 MLANAQ16655 118 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 HSD17B13Q7Z5P4 300 aaPredicted RBP8.66□□□□□ -1.02
VCAN-212ENST00000515397 SGPP2Q8IWX5 399 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 OR1P1Q8NH06 330 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 TMEM230Q96A57 120 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 GPR146Q96CH1 333 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 RRNAD1Q96FB5 475 aaKnown RBP8.66□□□□□ -1.02
VCAN-212ENST00000515397 C20orf24Q9BUV8 137 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 TMEM222Q9H0R3 208 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 TUBA4BQ9H853 241 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 V9GYH0 126 aa8.66□□□□□ -1.02
VCAN-212ENST00000515397 IGHV3-49A0A0A0MS15 119 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 CRYM-AS1A6NIL9 109 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 I3L2K1 104 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 CDS2O95674 445 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 CTSGP08311 255 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 ERHP84090 104 aaKnown RBP8.65□□□□□ -1.02
VCAN-212ENST00000515397 ZNF79Q15937 498 aa8.65□□□□□ -1.02
VCAN-212ENST00000515397 TMEM268Q5VZI3 342 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms