RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 RBMS2Q15434 407 aaKnown RBP7.04□□□□□ -1.28
TCOF1-212ENST00000513538 LAMTOR1Q6IAA8 161 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 ZNF818PQ6ZRF7 136 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 GIMAP1Q8WWP7 306 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 SRSF8Q9BRL6 282 aaKnown RBP7.04□□□□□ -1.28
TCOF1-212ENST00000513538 COMMD5Q9GZQ3 224 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 DIABLOQ9NR28 239 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 C21orf62Q9NYP8 219 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 SMPXQ9UHP9 88 aa7.04□□□□□ -1.28
TCOF1-212ENST00000513538 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 IGHV3OR16-13A0A075B7E8 117 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 IGHV3-74A0A0B4J1X5 117 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 TEX50A0A1B0GTY4 177 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 C15orf62A8K5M9 175 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 CHEK1O14757 476 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 HPRT1P00492 218 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 FCER2P06734 321 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 SERPINE2P07093 398 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 CTSGP08311 255 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 NQO2P16083 231 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 CBX5P45973 191 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 LSM3P62310 102 aaKnown RBP7.03□□□□□ -1.28
TCOF1-212ENST00000513538 UBE2NLQ5JXB2 153 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 SLC25A24Q6NUK1 477 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 SPSB3Q6PJ21 355 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 DHRS11Q6UWP2 260 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 UBAC2Q8NBM4 344 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 ZBTB34Q8NCN2 500 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 OR5AP2Q8NGF4 316 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 OR51H1Q8NH63 302 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 C2CD4CQ8TF44 421 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 SLC25A46Q96AG3 418 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 S100A16Q96FQ6 103 aaKnown RBP7.03□□□□□ -1.28
TCOF1-212ENST00000513538 FUNDC2Q9BWH2 189 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 RHPN1-AS1Q9BWJ2 59 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 SLC5A7Q9GZV3 580 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 MFFQ9GZY8 342 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 THYN1Q9P016 225 aa7.03□□□□□ -1.28
TCOF1-212ENST00000513538 F11RQ9Y624 299 aaKnown RBP7.03□□□□□ -1.28
TCOF1-212ENST00000513538 DBX1A6NMT0 343 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 TRAPPC2P0DI81 140 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 TRAPPC2BP0DI82 140 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 SMIM18P0DKX4 95 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 TAS2R20P59543 309 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 FXYD4P59646 89 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 ARPC4P59998 168 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 NCS1P62166 190 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 LYSMD2Q8IV50 215 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 GBGT1Q8N5D6 347 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 FAM24BQ8N5W8 94 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 Q8NAQ8 132 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 DMBX1Q8NFW5 382 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 CMTM3Q96MX0 182 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 PLEKHA2Q9HB19 425 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 NDUFA4L2Q9NRX3 87 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 NSG2Q9Y328 171 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 FAT2Q9NYQ8 4349 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 PKHD1P08F94 4074 aa7.02□□□□□ -1.29
TCOF1-212ENST00000513538 MEIS3P1A6NDR6 274 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 IGLL5B9A064 214 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 CA1P00915 261 aaPredicted RBP7.01□□□□□ -1.29
TCOF1-212ENST00000513538 IFNA4P05014 189 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 EIF4EP06730 217 aaKnown RBP7.01□□□□□ -1.29
TCOF1-212ENST00000513538 FGF2P09038 288 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 GIG44P09565 113 aaPredicted RBP7.01□□□□□ -1.29
TCOF1-212ENST00000513538 GNRHRP30968 328 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 CATR1Q13166 79 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 Q56UQ5 140 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 AADACL3Q5VUY0 350 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
TCOF1-212ENST00000513538 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 SAMD12Q8N8I0 201 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 TMEM116Q8NCL8 245 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 GPX8Q8TED1 209 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 OR10C1Q96KK4 312 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 ATP6V0BQ99437 205 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 AIFM2Q9BRQ8 373 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 HINT2Q9BX68 163 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 C6orf62Q9GZU0 229 aaPredicted RBP7.01□□□□□ -1.29
TCOF1-212ENST00000513538 VCX3AQ9NNX9 186 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 COMMD9Q9P000 198 aa7.01□□□□□ -1.29
TCOF1-212ENST00000513538 I3L2K1 104 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 NUPL2O15504 423 aaKnown RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 IGHV3-48P01763 117 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 APOHP02749 345 aaPredicted RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 RBMY1A1P0DJD3 496 aaKnown RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 RBMY1CP0DJD4 496 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 RFX2P48378 723 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 TCTAP57738 103 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 VBP1P61758 197 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 RBMY1FQ15415 496 aaKnown RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 CTF1Q16619 201 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 TMEM69Q5SWH9 247 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 LEMD1Q68G75 181 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms