RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 FAM210BQ96KR6 192 aa7.48□□□□□ -1.21
CLDND1-227ENST00000513452 AIFM2Q9BRQ8 373 aa7.48□□□□□ -1.21
CLDND1-227ENST00000513452 HINT2Q9BX68 163 aa7.48□□□□□ -1.21
CLDND1-227ENST00000513452 TMEM140Q9NV12 185 aa7.48□□□□□ -1.21
CLDND1-227ENST00000513452 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
CLDND1-227ENST00000513452 TRAV2A0A0B4J234 112 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 ZNF688P0C7X2 276 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 HTN3P15516 51 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 EMP1P54849 157 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 HES5Q5TA89 166 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 THOC7Q6I9Y2 204 aaKnown RBP7.47□□□□□ -1.21
CLDND1-227ENST00000513452 ZFP1Q6P2D0 407 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 ZNF773Q6PK81 442 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 AHSA2Q719I0 299 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 HSD17B13Q7Z5P4 300 aaPredicted RBP7.47□□□□□ -1.21
CLDND1-227ENST00000513452 SPAG16Q8N0X2 631 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 C6orf223Q8N319 242 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 NANOGP1Q8N7R0 232 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 DUSP18Q8NEJ0 188 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 STXBP6Q8NFX7 210 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 TMEM203Q969S6 136 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 GINS3Q9BRX5 216 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 RNF167Q9H6Y7 350 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 VSIRQ9H7M9 311 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 ELF5Q9UKW6 265 aaPredicted RBP7.47□□□□□ -1.21
CLDND1-227ENST00000513452 RAB22AQ9UL26 194 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 AGRNO00468 2067 aa7.47□□□□□ -1.21
CLDND1-227ENST00000513452 SULT1C2O00338 296 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 SPART-AS1P0CW21 52 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 NQO2P16083 231 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 DTYMKP23919 212 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 RASSF2P50749 326 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 TAS2R31P59538 309 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 DMBX1Q8NFW5 382 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 CYGBQ8WWM9 190 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 LSM10Q969L4 123 aaKnown RBP7.46□□□□□ -1.22
CLDND1-227ENST00000513452 NXF2Q9GZY0 626 aaKnown RBP7.46□□□□□ -1.22
CLDND1-227ENST00000513452 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
CLDND1-227ENST00000513452 NBDYA0A0U1RRE5 68 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 TEX50A0A1B0GTY4 177 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 K7EQG2 157 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 RBFOX2O43251 390 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLDND1-227ENST00000513452 IGHV3-48P01763 117 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 POU2AF1Q16633 256 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 TMEM88Q6PEY1 159 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 OR1L8Q8NGR8 309 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 SECTM1Q8WVN6 248 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 SLC25A46Q96AG3 418 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 GRAMD2BQ96HH9 432 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 MND1Q9BWT6 205 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 YTHDF1Q9BYJ9 559 aaKnown RBP7.45□□□□□ -1.22
CLDND1-227ENST00000513452 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 PSORS1C1Q9UIG5 152 aa7.45□□□□□ -1.22
CLDND1-227ENST00000513452 ERICH4A6NGS2 130 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 GNG7O60262 68 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 HPRT1P00492 218 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 FGF2P09038 288 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 MFAP4P55083 255 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 FAM3BP58499 235 aaPredicted RBP7.44□□□□□ -1.22
CLDND1-227ENST00000513452 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 RCN1Q15293 331 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 TOMM20LQ6UXN7 152 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 TMEM91Q6ZNR0 172 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 ATG101Q9BSB4 218 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 DCSTAMPQ9H295 470 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 TMEM231Q9H6L2 316 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 CCL28Q9NRJ3 127 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 NDUFA4L2Q9NRX3 87 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 V9GY05 133 aa7.44□□□□□ -1.22
CLDND1-227ENST00000513452 ARL6IP5O75915 188 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 CALRP27797 417 aaKnown RBP7.43□□□□□ -1.22
CLDND1-227ENST00000513452 ERVK-16P61578 105 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 CATR1Q13166 79 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 LAIR2Q6ISS4 152 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 CNIH2Q6PI25 160 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 OR51H1Q8NH63 302 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 NUDCD2Q8WVJ2 157 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 TXN2Q99757 166 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 NIPSNAP3BQ9BS92 247 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 C1QTNF4Q9BXJ3 329 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 OR51B2Q9Y5P1 312 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLDND1-227ENST00000513452 DNAH5Q8TE73 4624 aa7.43□□□□□ -1.22
CLDND1-227ENST00000513452 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 TEX48A0A1B0GUV7 120 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 TMEM189A5PLL7 270 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 METTL21EPA6NDL7 271 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 I3L2K1 104 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 MT-CO2P00403 227 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 RANBP1P43487 201 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
CLDND1-227ENST00000513452 RPS25P62851 125 aaKnown RBP7.42□□□□□ -1.22
CLDND1-227ENST00000513452 SPHARQ15513 63 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 PSMG4Q5JS54 123 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 PQLC1Q8N2U9 271 aa7.42□□□□□ -1.22
CLDND1-227ENST00000513452 BPIFB6Q8NFQ5 453 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms