RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ZNF506Q5JVG8 444 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 ZNF429Q86V71 674 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 C14orf166Q9Y224 244 aaKnown RBP13.3□□□□□ -0.28
HMGCL-209ENST00000513148 PCP4P48539 62 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 ZNF134P52741 427 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 DPM3Q9P2X0 92 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
HMGCL-209ENST00000513148 TGIF2-C20orf24A0A0A6YYL0 155 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 ZNF727A8MUV8 499 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 ZNF439Q8NDP4 499 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 RBMXL1Q96E39 390 aaKnown RBP13.29□□□□□ -0.28
HMGCL-209ENST00000513148 PARP12Q9H0J9 701 aaKnown RBP13.29□□□□□ -0.28
HMGCL-209ENST00000513148 AMMECR1Q9Y4X0 333 aaPredicted RBP13.29□□□□□ -0.28
HMGCL-209ENST00000513148 CLDN34H7C241 214 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 DLEU1O43261 78 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 OPN1MWP04001 364 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 OPN1MW2P0DN77 364 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 OPN1MW3P0DN78 364 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 ERVFC1-1P60608 527 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 DIAPH2-AS1Q14236 149 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 CT45A1Q5HYN5 189 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 DPPA3Q6W0C5 159 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 CT45A3Q8NHU0 189 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 JMJD8Q96S16 334 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 ABHD14AQ9BUJ0 271 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 CTDSP1Q9GZU7 261 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 GOLT1BQ9Y3E0 138 aa13.29□□□□□ -0.28
HMGCL-209ENST00000513148 H3BUX3 64 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 YPEL1O60688 119 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-209ENST00000513148 CEACAM3P40198 252 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 IER3P46695 156 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 RND3P61587 244 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 TPTE2P1Q5T6R2 138 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 SLC25A48Q6ZT89 311 aaKnown RBP13.28□□□□□ -0.28
HMGCL-209ENST00000513148 LRTM2Q8N967 370 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 OR10J5Q8NHC4 309 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 SSMEM1Q8WWF3 244 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 TOMM40LQ969M1 308 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 RPEQ96AT9 228 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 ACY3Q96HD9 319 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 YPEL2Q96QA6 119 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 WFDC1Q9HC57 220 aa13.28□□□□□ -0.28
HMGCL-209ENST00000513148 SNRPCP09234 159 aaKnown RBP13.27□□□□□ -0.28
HMGCL-209ENST00000513148 REG1BP48304 166 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 ZNF343Q6P1L6 599 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 SPSB3Q6PJ21 355 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 LYG1Q8N1E2 194 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 RARRES2Q99969 163 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.28
HMGCL-209ENST00000513148 LY6LH3BQJ8 138 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 HBE1P02100 147 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 AMBPP02760 352 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 FHITP49789 147 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 ZNF266Q14584 549 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
HMGCL-209ENST00000513148 LRRC75BQ2VPJ9 315 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 Q6ZS49 121 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 LINC00311Q8N616 119 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 C8orf31Q8N9H6 132 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 MEGF9Q9H1U4 602 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 ANXA10Q9UJ72 324 aa13.27□□□□□ -0.29
HMGCL-209ENST00000513148 CRYM-AS1A6NIL9 109 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 EREGO14944 169 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 SCAF4O95104 1147 aaKnown RBP13.26□□□□□ -0.29
HMGCL-209ENST00000513148 LY6EQ16553 131 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 C21orf62-AS1Q17RA5 79 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 PDZD11Q5EBL8 140 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 FAM213BQ8TBF2 198 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 WSB1Q9Y6I7 421 aa13.26□□□□□ -0.29
HMGCL-209ENST00000513148 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 PPP5D1E7EU14 171 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 CD24P25063 80 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 IL3RAP26951 378 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 IQCJQ1A5X6 159 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-209ENST00000513148 ZNF25P17030 456 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-209ENST00000513148 ICAM4Q14773 271 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 FOXRED2Q8IWF2 684 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 IFI27L2Q9H2X8 130 aa13.25□□□□□ -0.29
HMGCL-209ENST00000513148 LSM5Q9Y4Y9 91 aaKnown RBP13.25□□□□□ -0.29
HMGCL-209ENST00000513148 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
HMGCL-209ENST00000513148 ABHD14BQ96IU4 210 aa13.24□□□□□ -0.29
HMGCL-209ENST00000513148 TMEM208Q9BTX3 173 aa13.24□□□□□ -0.29
HMGCL-209ENST00000513148 PRR13Q9NZ81 148 aa13.24□□□□□ -0.29
HMGCL-209ENST00000513148 RNF150Q9ULK6 438 aa13.24□□□□□ -0.29
HMGCL-209ENST00000513148 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 A0A1B0GU03 582 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 TIMM23O14925 209 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-209ENST00000513148 PI3P19957 117 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 CCDC144NLQ6NUI1 221 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 ODF3L1Q8IXM7 274 aa13.23□□□□□ -0.29
HMGCL-209ENST00000513148 VPREB3Q9UKI3 123 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms