RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TAC3Q9UHF0 121 aa4.49□□□□□ -1.69
CHD1-208ENST00000512392 DSPPQ9NZW4 1301 aa4.49□□□□□ -1.69
CHD1-208ENST00000512392 C7orf71A4D174 169 aa4.48□□□□□ -1.69
CHD1-208ENST00000512392 PSMB8P28062 276 aa4.48□□□□□ -1.69
CHD1-208ENST00000512392 CMC4P56277 68 aaPredicted RBP4.48□□□□□ -1.69
CHD1-208ENST00000512392 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CHD1-208ENST00000512392 TRAPPC6BQ86SZ2 158 aa4.48□□□□□ -1.69
CHD1-208ENST00000512392 MAGOHBQ96A72 148 aaKnown RBP4.48□□□□□ -1.69
CHD1-208ENST00000512392 NUP210Q8TEM1 1887 aaPredicted RBP4.48□□□□□ -1.69
CHD1-208ENST00000512392 CCDC18Q5T9S5 1454 aa4.48□□□□□ -1.69
CHD1-208ENST00000512392 UBFD1O14562 309 aaKnown RBP4.47□□□□□ -1.69
CHD1-208ENST00000512392 IGHV3-23P01764 117 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 FABP2P12104 132 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 TGFBR1P36897 503 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 GUCA1AP43080 201 aaPredicted RBP4.47□□□□□ -1.69
CHD1-208ENST00000512392 HES1Q14469 280 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 RRN3P1Q2M238 152 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 MPV17L2Q567V2 206 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 PYY3Q5JQD4 70 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 WFDC11Q8NEX6 87 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 BANF2Q9H503 90 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 ZNF286AQ9HBT8 521 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 HSPE1-MOB4S4R3N1 261 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 MYOM2P54296 1465 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 DNMBPQ6XZF7 1577 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 A0A0D9SEW6 157 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 LINC00862A6NCI5 91 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 BBIP1A8MTZ0 92 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 I3L521 148 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 TMEM256-PLSCR3K7ERE1 68 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 UBE2L6O14933 153 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 LY6G6DO95868 133 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 CRYBB3P26998 211 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 TMBIM6P55061 237 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 FOXA3P55318 350 aaPredicted RBP4.47□□□□□ -1.69
CHD1-208ENST00000512392 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 C5orf17Q8NAS9 161 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 OR4K13Q8NH42 304 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 CKLFQ9UBR5 152 aa4.47□□□□□ -1.69
CHD1-208ENST00000512392 MYOM3Q5VTT5 1437 aa4.46□□□□□ -1.69
CHD1-208ENST00000512392 TNS2Q63HR2 1409 aa4.46□□□□□ -1.69
CHD1-208ENST00000512392 BUB1B-PAK6H3BSN5 160 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 SOCS2O14508 198 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 CRHBPP24387 322 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 ZNF136P52737 540 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 OR4S1Q8NGB4 309 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 OR8D4Q8NGM9 314 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 C2orf15Q8WU43 125 aaKnown RBP4.46□□□□□ -1.7
CHD1-208ENST00000512392 SMIM14Q96QK8 99 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 DERL1Q9BUN8 251 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 PRO1933Q9H354 126 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 TCEAL2Q9H3H9 227 aaPredicted RBP4.46□□□□□ -1.7
CHD1-208ENST00000512392 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 CSAG2Q9Y5P2 127 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 CEP162Q5TB80 1403 aa4.46□□□□□ -1.7
CHD1-208ENST00000512392 IGHV3-72A0A0B4J1Y9 119 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 FNDC10F2Z333 226 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 RPL22L1Q6P5R6 122 aaKnown RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 LINC00305Q7Z4B0 112 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 FER1L6-AS1Q8NA97 138 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 TMEM158Q8WZ71 300 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 PLA2G12AQ9BZM1 189 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 ZNF556Q9HAH1 456 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 CELA1Q9UNI1 258 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 COL3A1P02461 1466 aaPredicted RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 TCOF1Q13428 1488 aaKnown RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 AKAP12Q02952 1782 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 PCSK5Q92824 1860 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 GON4LQ3T8J9 2241 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 NCR2O95944 276 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 ELK1P19419 428 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BOP23527 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BBP33778 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BDP58876 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BCP62807 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 CATR1Q13166 79 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST2H2BEQ16778 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 SSX8Q7RTT4 187 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 RPS19BP1Q86WX3 136 aaKnown RBP4.45□□□□□ -1.7
CHD1-208ENST00000512392 LMO3Q8TAP4 145 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BHQ93079 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 C2orf50Q96LR7 162 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BNQ99877 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 HIST1H2BMQ99879 126 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 Q9H521 79 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 RNF122Q9H9V4 155 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 CAMSAP2Q08AD1 1489 aa4.45□□□□□ -1.7
CHD1-208ENST00000512392 C9JCJ5 164 aa4.44□□□□□ -1.7
CHD1-208ENST00000512392 ZNF324O75467 553 aaPredicted RBP4.44□□□□□ -1.7
CHD1-208ENST00000512392 TCRAP04437 139 aa4.44□□□□□ -1.7
CHD1-208ENST00000512392 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms