RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 CX3CR1P49238 355 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 LIM2P55344 173 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RAB8AP61006 207 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SNRPD2P62316 118 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 EIF5AP63241 154 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 PAFAH1B2P68402 229 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SLC35B1P78383 322 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RHOGP84095 191 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RUNX1Q01196 453 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ST3GAL4Q11206 333 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 JOSD1Q15040 202 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 FAM162BQ5T6X4 162 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 AGTRAPQ6RW13 159 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 FBXW12Q6X9E4 464 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ZNF664Q8N3J9 261 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 CLDN19Q8N6F1 224 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 TCTEX1D1Q8N7M0 179 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 YIPF7Q8N8F6 280 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 BPIFB6Q8NFQ5 453 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 OR8D4Q8NGM9 314 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 OR5B3Q8NH48 314 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 MAGOHBQ96A72 148 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 APOBEC3DQ96AK3 386 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 MALSU1Q96EH3 234 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 MRPS24Q96EL2 167 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SDSLQ96GA7 329 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 TIMD4Q96H15 378 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 NRIP2Q9BQI9 281 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 EFCAB11Q9BUY7 163 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 FAIM2Q9BWQ8 316 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 TAPBPLQ9BX59 468 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ACTR3CQ9C0K3 210 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 OR2J1Q9GZK6 312 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 DEFB127Q9H1M4 99 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 CDC42EP4Q9H3Q1 356 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ZDHHC11Q9H8X9 412 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 NMRAL1Q9HBL8 299 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ACP6Q9NPH0 428 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SMCO4Q9NRQ5 59 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RBFOX1Q9NWB1 397 aaKnown RBP2.82□□□□□ -1.96
PDE4D-220ENST00000512069 MED29Q9NX70 200 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SLC25A37Q9NYZ2 338 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 COMMD3Q9UBI1 195 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 NAT8Q9UHE5 227 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 PCYOX1Q9UHG3 505 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RIMS3Q9UJD0 308 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 KLK12Q9UKR0 248 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 ERG28Q9UKR5 140 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 TRAPPC2LQ9UL33 140 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 RFNGQ9Y644 331 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 WSB1Q9Y6I7 421 aa2.82□□□□□ -1.96
PDE4D-220ENST00000512069 SCN3AQ9NY46 2000 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 NINQ8N4C6 2090 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 HEATR5BQ9P2D3 2071 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 BORCS7-ASMTA0A0B4J1R7 106 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 A0A0J9YY10 115 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 TMEM269A0A1B0GVZ9 245 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EXOC1LA0A1B0GW35 172 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 LRP5LA4QPB2 252 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 TMEM189A5PLL7 270 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 OR5H1A6NKK0 313 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 FAM159BA6NKW6 160 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EEF1E1-BLOC1S5C9J1V9 151 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 RPL36A-HNRNPH2H7BZ11 118 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 HMGB3O15347 200 aaKnown RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EEF1E1O43324 174 aaKnown RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EFNA2O43921 213 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 OR7C1O76099 320 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 DIRAS1O95057 198 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 GCGP01275 180 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 PMP2P02689 132 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 OPN1SWP03999 348 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 ADRA2AP08913 450 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 LIMS3P0CW19 117 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 LIMS4P0CW20 117 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 SMIM17P0DL12 118 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 SULT1A3P0DMM9 295 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 SULT1A4P0DMN0 295 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 LOXP28300 417 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 CD34P28906 385 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 RPL12P30050 165 aaKnown RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 CDKN2BP42772 138 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 KIR2DS4P43632 304 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 ZNF136P52737 540 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 PSG4Q00888 419 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EWSR1Q01844 656 aaKnown RBP eCLIP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 DAZ2Q13117 558 aaKnown RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 CLINT1Q14677 625 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 HIST3H3Q16695 136 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 CCSMST1Q4G0I0 132 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 MORN2Q502X0 79 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 PRSS54Q6PEW0 395 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 DUX4L9Q6RFH8 374 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-220ENST00000512069 Q6ZSR3 168 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 OR8I2Q8N0Y5 310 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 ZNF567Q8N184 647 aa2.81□□□□□ -1.96
PDE4D-220ENST00000512069 MS4A15Q8N5U1 240 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms