RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 THAP7Q9BT49 309 aaPredicted RBP12.48□□□□□ -0.41
DDX41-213ENST00000512027 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
DDX41-213ENST00000512027 ANKRD20A5PA0PJZ0 165 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 TMEM213A2RRL7 107 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 FABP12A6NFH5 140 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 OR2T8A6NH00 312 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 K7EIM0 57 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 LGALS9O00182 355 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 GSTZ1O43708 216 aaPredicted RBP12.47□□□□□ -0.41
DDX41-213ENST00000512027 P0C879 139 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 IGHV4-30-4P0DP06 118 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 TRIM16LQ309B1 348 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 LCN12Q6JVE5 192 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 GPHB5Q86YW7 130 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 Q8N402 240 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 CCDC71LQ8N9Z2 235 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 OR51S1Q8NGJ8 323 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 C5orf66Q9H5L9 145 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 THYN1Q9P016 225 aa12.47□□□□□ -0.41
DDX41-213ENST00000512027 A0A0B4J293 547 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 F8W735 103 aaPredicted RBP12.46□□□□□ -0.41
DDX41-213ENST00000512027 TGOLN2O43493 480 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 OR5AC1P0C628 307 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
DDX41-213ENST00000512027 PRCDQ00LT1 54 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 TM4SF20Q53R12 229 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 PLET1Q6UQ28 207 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 UBAC2Q8NBM4 344 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 LHFPL5Q8TAF8 219 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 VN1R17PQ8TDU5 208 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 SCARB1Q8WTV0 552 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 WDR89Q96FK6 387 aaPredicted RBP12.46□□□□□ -0.41
DDX41-213ENST00000512027 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
DDX41-213ENST00000512027 C14orf166Q9Y224 244 aaKnown RBP12.46□□□□□ -0.41
DDX41-213ENST00000512027 U3KQK5 164 aa12.46□□□□□ -0.41
DDX41-213ENST00000512027 CYB5BO43169 146 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 IGHV3-48P01763 117 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 CBLN1P23435 193 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 UCP1P25874 307 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
DDX41-213ENST00000512027 DEFB114Q30KQ6 69 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 FAM106AQ4KMX7 169 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 OR2C3Q8N628 320 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 CHRDL1Q9BU40 450 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 C21orf62Q9NYP8 219 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 PRR13Q9NZ81 148 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 RABL2AQ9UBK7 228 aaPredicted RBP12.45□□□□□ -0.42
DDX41-213ENST00000512027 MLXQ9UH92 298 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 RABL2BQ9UNT1 228 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 V9GYH0 126 aa12.45□□□□□ -0.42
DDX41-213ENST00000512027 IGHV3OR16-8A0A075B7F1 116 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 TEX13DA0A0J9YY54 714 aaPredicted RBP12.44□□□□□ -0.42
DDX41-213ENST00000512027 ZNF785A8K8V0 405 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 A8MWP6 167 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 ST8SIA3O43173 380 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 GUCA2BQ16661 112 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 SGPP2Q8IWX5 399 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 UXS1Q8NBZ7 420 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 OR1P1Q8NH06 330 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 PLEKHA3Q9HB20 300 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 GPR132Q9UNW8 380 aa12.44□□□□□ -0.42
DDX41-213ENST00000512027 CD7P09564 240 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 ADMP35318 185 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 CD81P60033 236 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
DDX41-213ENST00000512027 ZNF79Q15937 498 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 PYDC2Q56P42 97 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 Q56UQ5 140 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 Q6ZRM9 215 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 SLC35G3Q8N808 338 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 RNASE11Q8TAA1 199 aaKnown RBP12.43□□□□□ -0.42
DDX41-213ENST00000512027 GLYATL2Q8WU03 294 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 TMEM230Q96A57 120 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 ZNF414Q96IQ9 312 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 PRRT1Q99946 306 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 C19orf73Q9NVV2 129 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
DDX41-213ENST00000512027 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 I3L2K1 104 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 IFNA17P01571 189 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 ETV6P41212 452 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 TMEM61Q8N0U2 210 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 PINX1Q96BK5 328 aaKnown RBP12.42□□□□□ -0.42
DDX41-213ENST00000512027 RRNAD1Q96FB5 475 aaKnown RBP12.42□□□□□ -0.42
DDX41-213ENST00000512027 BSCL2Q96G97 398 aaPredicted RBP12.42□□□□□ -0.42
DDX41-213ENST00000512027 WWC2-AS2Q96NR7 200 aa12.42□□□□□ -0.42
DDX41-213ENST00000512027 ZNF436Q9C0F3 470 aaPredicted RBP12.42□□□□□ -0.42
DDX41-213ENST00000512027 SLC2A8Q9NY64 477 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms