RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 FKBP11Q9NYL4 201 aa14.02□□□□□ -0.17
LSM6-206ENST00000510331 C3orf85A0A1B0GTC6 90 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 K7EIM0 57 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 CTDSPLO15194 276 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 CYB5BO43169 146 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 TGOLN2O43493 480 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 P0C879 139 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 AKR1C2P52895 323 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 PRCDQ00LT1 54 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 MEF2DQ14814 521 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 DEFB114Q30KQ6 69 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 WDR89Q96FK6 387 aaPredicted RBP14.01□□□□□ -0.17
LSM6-206ENST00000510331 TMEM56Q96MV1 263 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 RCHY1Q96PM5 261 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
LSM6-206ENST00000510331 F8W735 103 aaPredicted RBP14□□□□□ -0.17
LSM6-206ENST00000510331 CTSDP07339 412 aaPredicted RBP14□□□□□ -0.17
LSM6-206ENST00000510331 CBLN1P23435 193 aa14□□□□□ -0.17
LSM6-206ENST00000510331 CD81P60033 236 aa14□□□□□ -0.17
LSM6-206ENST00000510331 TRIM16LQ309B1 348 aa14□□□□□ -0.17
LSM6-206ENST00000510331 SP6Q3SY56 376 aa14□□□□□ -0.17
LSM6-206ENST00000510331 FAM106AQ4KMX7 169 aa14□□□□□ -0.17
LSM6-206ENST00000510331 TM4SF20Q53R12 229 aa14□□□□□ -0.17
LSM6-206ENST00000510331 PLET1Q6UQ28 207 aa14□□□□□ -0.17
LSM6-206ENST00000510331 CCDC71LQ8N9Z2 235 aa14□□□□□ -0.17
LSM6-206ENST00000510331 ZFAND1Q8TCF1 268 aa14□□□□□ -0.17
LSM6-206ENST00000510331 SCARB1Q8WTV0 552 aa14□□□□□ -0.17
LSM6-206ENST00000510331 WFDC10AQ9H1F0 79 aa14□□□□□ -0.17
LSM6-206ENST00000510331 PLEKHA3Q9HB20 300 aa14□□□□□ -0.17
LSM6-206ENST00000510331 C21orf62Q9NYP8 219 aa14□□□□□ -0.17
LSM6-206ENST00000510331 MLXQ9UH92 298 aa14□□□□□ -0.17
LSM6-206ENST00000510331 CEPT1Q9Y6K0 416 aa14□□□□□ -0.17
LSM6-206ENST00000510331 DNAH7Q8WXX0 4024 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 NBEAL2Q6ZNJ1 2754 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 A8MZ25 164 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 AKAIN1P0CW23 69 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 GUCA2BQ16661 112 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 BTNL8Q6UX41 500 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 TMEM61Q8N0U2 210 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 UBAC2Q8NBM4 344 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 OR1P1Q8NH06 330 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 TMEM190Q8WZ59 177 aa13.99□□□□□ -0.17
LSM6-206ENST00000510331 ZNF436Q9C0F3 470 aaPredicted RBP13.99□□□□□ -0.17
LSM6-206ENST00000510331 TECRQ9NZ01 308 aaKnown RBP13.99□□□□□ -0.17
LSM6-206ENST00000510331 A0A0G2JRQ6 117 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 ZNF785A8K8V0 405 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 DISC1C4P0D8 188 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 CD7P09564 240 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 UCP1P25874 307 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 UXS1Q8NBZ7 420 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 ZNF114Q8NC26 417 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 MISP3Q96FF7 219 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 BSCL2Q96G97 398 aaPredicted RBP13.98□□□□□ -0.17
LSM6-206ENST00000510331 TM2D3Q9BRN9 247 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 CHRDL1Q9BU40 450 aa13.98□□□□□ -0.17
LSM6-206ENST00000510331 NXF2Q9GZY0 626 aaKnown RBP13.98□□□□□ -0.17
LSM6-206ENST00000510331 A0A0B4J293 547 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 ANKRD20A5PA0PJZ0 165 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 GSTZ1O43708 216 aaPredicted RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 OR5AC1P0C628 307 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 TNFSF8P32971 234 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 ADMP35318 185 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 HSPE1P61604 102 aaKnown RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 Q56UQ5 140 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 ZNF57Q68EA5 555 aaPredicted RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 OR51S1Q8NGJ8 323 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 OR1L6Q8NGR2 347 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 NEURL2Q9BR09 285 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 RTBDNQ9BSG5 229 aaPredicted RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 C5orf66Q9H5L9 145 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 RABL2AQ9UBK7 228 aaPredicted RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 RABL2BQ9UNT1 228 aa13.97□□□□□ -0.17
LSM6-206ENST00000510331 C14orf166Q9Y224 244 aaKnown RBP13.97□□□□□ -0.17
LSM6-206ENST00000510331 IGHV3OR16-8A0A075B7F1 116 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 CCDC160A6NGH7 325 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 ST8SIA3O43173 380 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 SURF2Q15527 256 aaPredicted RBP13.96□□□□□ -0.17
LSM6-206ENST00000510331 SLC35G3Q8N808 338 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 LHFPL5Q8TAF8 219 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 ZNF414Q96IQ9 312 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 NAA60Q9H7X0 242 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 ZMAT4Q9H898 229 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 PALMDQ9NP74 551 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 RSL24D1Q9UHA3 163 aaKnown RBP13.96□□□□□ -0.17
LSM6-206ENST00000510331 UFC1Q9Y3C8 167 aa13.96□□□□□ -0.17
LSM6-206ENST00000510331 RYR3Q15413 4870 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 I3L2K1 104 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 SCAF4O95104 1147 aaKnown RBP13.95□□□□□ -0.18
LSM6-206ENST00000510331 IGHV3-48P01763 117 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 SPSB3Q6PJ21 355 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 RNASE11Q8TAA1 199 aaKnown RBP13.95□□□□□ -0.18
LSM6-206ENST00000510331 PRRT1Q99946 306 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 SOSTQ9BQB4 213 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 RBM38Q9H0Z9 239 aaKnown RBP13.95□□□□□ -0.18
LSM6-206ENST00000510331 TUBA4BQ9H853 241 aa13.95□□□□□ -0.18
LSM6-206ENST00000510331 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms