RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TMEM222Q9H0R3 208 aa10.32□□□□□ -0.76
SNF8-206ENST00000509989 PRNDQ9UKY0 176 aa10.32□□□□□ -0.76
SNF8-206ENST00000509989 LSM4Q9Y4Z0 139 aaKnown RBP10.32□□□□□ -0.76
SNF8-206ENST00000509989 K7EIM0 57 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 NXPH3O95157 252 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 CDS2O95674 445 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 FGF2P09038 288 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 AKR1C4P17516 323 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 ZP3P21754 424 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 MECP2P51608 486 aaKnown RBP10.31□□□□□ -0.76
SNF8-206ENST00000509989 CCR6P51684 374 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 AKR1C2P52895 323 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 HSPE1P61604 102 aaKnown RBP10.31□□□□□ -0.76
SNF8-206ENST00000509989 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 TMEM187Q14656 261 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 SURF2Q15527 256 aaPredicted RBP10.31□□□□□ -0.76
SNF8-206ENST00000509989 ZNF429Q86V71 674 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 OR2C3Q8N628 320 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 GPR61Q9BZJ8 451 aa10.31□□□□□ -0.76
SNF8-206ENST00000509989 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
SNF8-206ENST00000509989 F11RQ9Y624 299 aaKnown RBP10.31□□□□□ -0.76
SNF8-206ENST00000509989 LY86O95711 162 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 IGLV1-51P01701 117 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 CLEC3BP05452 202 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 GPR183P32249 361 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 ARL3P36405 182 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 SCARB1Q8WTV0 552 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 EEF1AKMT3Q96AZ1 226 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 OR4C12Q96R67 309 aa10.3□□□□□ -0.76
SNF8-206ENST00000509989 SRSF8Q9BRL6 282 aaKnown RBP10.3□□□□□ -0.76
SNF8-206ENST00000509989 HIST1H1BP16401 226 aaKnown RBP10.29□□□□□ -0.76
SNF8-206ENST00000509989 BTCP35070 178 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 ZNF57Q68EA5 555 aaPredicted RBP10.29□□□□□ -0.76
SNF8-206ENST00000509989 LYZL2Q7Z4W2 148 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 TMED4Q7Z7H5 227 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 TSC22D3Q99576 134 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 CHRDL1Q9BU40 450 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 SCP2D1Q9UJQ7 156 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 FLVCR2Q9UPI3 526 aa10.29□□□□□ -0.76
SNF8-206ENST00000509989 IGHV3OR16-8A0A075B7F1 116 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 OR2T8A6NH00 312 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 A6NHS1 94 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 I3L2K1 104 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 GGCTO75223 188 aaKnown RBP10.28□□□□□ -0.76
SNF8-206ENST00000509989 DHFRP00374 187 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 GP9P14770 177 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 ADMP35318 185 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 INSL3P51460 131 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 MLANAQ16655 118 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 ANKRD55Q3KP44 614 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 SPANXN2Q5MJ10 180 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
SNF8-206ENST00000509989 MISP3Q96FF7 219 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 FKBP11Q9NYL4 201 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 MRPL36Q9P0J6 103 aaKnown RBP10.28□□□□□ -0.76
SNF8-206ENST00000509989 CACNG5Q9UF02 275 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
SNF8-206ENST00000509989 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 RNASE2P10153 161 aaKnown RBP10.27□□□□□ -0.77
SNF8-206ENST00000509989 CNPY1Q3B7I2 92 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 TM4SF20Q53R12 229 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 THOC7Q6I9Y2 204 aaKnown RBP10.27□□□□□ -0.77
SNF8-206ENST00000509989 SGPP2Q8IWX5 399 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 Q8N1Y9 231 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 TMEM170AQ8WVE7 144 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 GALNT14Q96FL9 552 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 ASCL2Q99929 193 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 ELOVL1Q9BW60 279 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 NDUFA13Q9P0J0 144 aa10.27□□□□□ -0.77
SNF8-206ENST00000509989 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 PLA2G10O15496 165 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 TGOLN2O43493 480 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 MT-CO2P00403 227 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 IFNA17P01571 189 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 IL7P13232 177 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 DHODHQ02127 395 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
SNF8-206ENST00000509989 GPHB5Q86YW7 130 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 UBAC2Q8NBM4 344 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 OR1P1Q8NH06 330 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 RNASE11Q8TAA1 199 aaKnown RBP10.26□□□□□ -0.77
SNF8-206ENST00000509989 VN1R17PQ8TDU5 208 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
SNF8-206ENST00000509989 RRNAD1Q96FB5 475 aaKnown RBP10.26□□□□□ -0.77
SNF8-206ENST00000509989 CXorf58Q96LI9 332 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 PLEKHA3Q9HB20 300 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
SNF8-206ENST00000509989 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
SNF8-206ENST00000509989 ZNF207O43670 478 aaKnown RBP10.25□□□□□ -0.77
SNF8-206ENST00000509989 FOLR2P14207 255 aa10.25□□□□□ -0.77
SNF8-206ENST00000509989 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
SNF8-206ENST00000509989 AARDQ4LEZ3 155 aa10.25□□□□□ -0.77
SNF8-206ENST00000509989 NMSQ5H8A3 153 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms