RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SNAPC5O75971 98 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 KBTBD11O94819 623 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SFT2D2O95562 160 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 DUS4LO95620 317 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 DHFRP00374 187 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGLV2-23P01705 113 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGF1P05019 195 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 IL5P05113 134 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 CRYGBP07316 175 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR5AC1P0C628 307 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR4E1P0C645 316 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SAA1P0DJI8 122 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 VDAC1P21796 283 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 LINC00205P59089 165 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM267Q0VDI3 215 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM187Q14656 261 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TRIM16LQ309B1 348 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR2B11Q5JQS5 317 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SERTAD4-AS1Q5TG53 156 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 ASPHD1Q5U4P2 390 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 H2BFWTQ7Z2G1 175 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMED4Q7Z7H5 227 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 LYG2Q86SG7 212 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF695Q8IW36 515 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 COMMD1Q8N668 190 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 MINDY2Q8NBR6 621 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 ADAD2Q8NCV1 583 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 DMBX1Q8NFW5 382 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 COQ8AQ8NI60 647 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 GLYATL2Q8WU03 294 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 CHPT1Q8WUD6 406 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 LSM10Q969L4 123 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SEC22AQ96IW7 307 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 DUX5Q96PT3 197 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TP53RKQ96S44 253 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SRSF8Q9BRL6 282 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 MARVELD1Q9BSK0 173 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 GPN1Q9HCN4 374 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 TNFRSF19Q9NS68 423 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 METTL1Q9UBP6 276 aaKnown RBP4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 SHPKQ9UHJ6 478 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 PRNDQ9UKY0 176 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF257Q9Y2Q1 563 aa4.32□□□□□ -1.72
HMGB1P44-201ENST00000508597 IGHV7-81A0A0B4J1V7 117 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 C9orf170A2RU37 121 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SNRPGP15A8MWD9 76 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 INMT-MINDY4F8WBC2 141 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 UPK2O00526 184 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 S1PR2O95136 353 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 CNIH1O95406 144 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 BRI3O95415 125 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 KRASP01116 189 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 HLA-AP01891 365 aaKnown RBP4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLC25A6P12236 298 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 HLA-GP17693 338 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 VDAC2P45880 294 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 AKR1C2P52895 323 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 RPL8P62917 257 aaKnown RBP4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 BLCAPP62952 87 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SUPT4H1P63272 117 aaKnown RBP4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLC35B1P78383 322 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 CX3CL1P78423 397 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 DHRS2Q13268 280 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 PPP1R1AQ13522 171 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 PRSS8Q16651 343 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 RGS21Q2M5E4 152 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 AKIRIN2Q53H80 203 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 MORN5Q5VZ52 161 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR4A47Q6IF82 309 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 Q6ZSV7 163 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 NRARPQ7Z6K4 114 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLC35E3Q7Z769 313 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF429Q86V71 674 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SELENOHQ8IZQ5 122 aaKnown RBP4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR5B3Q8NH48 314 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR4A16Q8NH70 328 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 MITD1Q8WV92 249 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 PHB2Q99623 299 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SPIN2AQ99865 258 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 SPIN2BQ9BPZ2 258 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 COMMD5Q9GZQ3 224 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 OR51J1Q9H342 316 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 FBXL15Q9H469 300 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 ZNF702PQ9H963 129 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 NUDT15Q9NV35 164 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 COA4Q9NYJ1 87 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 TMED3Q9Y3Q3 217 aa4.31□□□□□ -1.72
HMGB1P44-201ENST00000508597 TRAV6A0A075B6T7 132 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 A0A1B0GU03 582 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 C15orf61A6NNL5 157 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 H3BUA1 57 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 CYB5BO43169 146 aa4.3□□□□□ -1.72
HMGB1P44-201ENST00000508597 CA2P00918 260 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms