RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OR1N2Q8NGR9 330 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 EEF1AKMT3Q96AZ1 226 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 P2RX4Q99571 388 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 ALX4Q9H161 411 aaPredicted RBP7.1□□□□□ -1.27
NUP54-207ENST00000508583 GNB4Q9HAV0 340 aa7.1□□□□□ -1.27
NUP54-207ENST00000508583 ZMAT5Q9UDW3 170 aaKnown RBP7.1□□□□□ -1.27
NUP54-207ENST00000508583 TRBV7-1A0A0A6YYK4 115 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 A0A0B4J293 547 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 A0A1B0GU03 582 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 LINC01619G3V211 115 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 ST8SIA3O43173 380 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 WIPF1O43516 503 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 LY86O95711 162 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 IFNA21P01568 189 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 TCRBP04435 133 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 OR4E1P0C645 316 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 FHL3Q13643 280 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 KIAA0141Q14154 515 aaPredicted RBP7.09□□□□□ -1.27
NUP54-207ENST00000508583 TATDN3Q17R31 274 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 KLK9Q2XQG4 91 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 AARDQ4LEZ3 155 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 ZNF343Q6P1L6 599 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 LYG2Q86SG7 212 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 ZNF114Q8NC26 417 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 WFDC9Q8NEX5 89 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 OR1P1Q8NH06 330 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 LHFPL5Q8TAF8 219 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 CASTOR1Q8WTX7 329 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 RAX2Q96IS3 184 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 HIPK2Q9H2X6 1198 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 NUDT15Q9NV35 164 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 GAR1Q9NY12 217 aaKnown RBP7.09□□□□□ -1.27
NUP54-207ENST00000508583 CACNG5Q9UF02 275 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
NUP54-207ENST00000508583 F11RQ9Y624 299 aaKnown RBP7.09□□□□□ -1.27
NUP54-207ENST00000508583 IGLV11-55A0A075B6I3 123 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 A0A1B0GW64 132 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 C9orf170A2RU37 121 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 E7EUB6 86 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 SCGB2A1O75556 95 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 MED6O75586 246 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 OR2J3O76001 311 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 IGHV3-11P01762 117 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 REG1AP05451 166 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 WT1-ASQ06250 92 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 DHRS2Q13268 280 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 EXOSC2Q13868 293 aaKnown RBP7.08□□□□□ -1.28
NUP54-207ENST00000508583 DEFB136Q30KP8 78 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 PDLIM3Q53GG5 364 aaPredicted RBP7.08□□□□□ -1.28
NUP54-207ENST00000508583 NMSQ5H8A3 153 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 SLC25A24Q6NUK1 477 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 OR2C3Q8N628 320 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 OR10W1Q8NGF6 305 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 OR1S1Q8NH92 325 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 VN1R17PQ8TDU5 208 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 OR5B12Q96R08 314 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 PEF1Q9UBV8 284 aaKnown RBP7.08□□□□□ -1.28
NUP54-207ENST00000508583 TBC1D24Q9ULP9 559 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
NUP54-207ENST00000508583 DBX1A6NMT0 343 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 CEBPZOSA8MTT3 80 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 PRH1P02810 166 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 MYOD1P15172 320 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 ANXA7P20073 488 aaKnown RBP7.07□□□□□ -1.28
NUP54-207ENST00000508583 HTR2BP41595 481 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 INSL3P51460 131 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 ATP5IP56385 69 aaPredicted RBP7.07□□□□□ -1.28
NUP54-207ENST00000508583 TNFRSF9Q07011 255 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 IZUMO4Q1ZYL8 232 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 RPEL1Q2QD12 228 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 PLET1Q6UQ28 207 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 ETV3LQ6ZN32 361 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 LYZL2Q7Z4W2 148 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 GPR146Q96CH1 333 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 CIB3Q96Q77 187 aaPredicted RBP7.07□□□□□ -1.28
NUP54-207ENST00000508583 ELOVL1Q9BW60 279 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 GPN1Q9HCN4 374 aaPredicted RBP7.07□□□□□ -1.28
NUP54-207ENST00000508583 HEYLQ9NQ87 328 aaPredicted RBP7.07□□□□□ -1.28
NUP54-207ENST00000508583 FLVCR2Q9UPI3 526 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
NUP54-207ENST00000508583 TRAV6A0A075B6T7 132 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 IGHV4OR15-8A0A075B7B6 117 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 A0A087WW49 117 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.06□□□□□ -1.28
NUP54-207ENST00000508583 A0A0G2JRQ6 117 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 RPS10-NUDT3A0A1W2PQS6 291 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 PRAF2O60831 178 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 GGCTO75223 188 aaKnown RBP7.06□□□□□ -1.28
NUP54-207ENST00000508583 HOXD3P31249 432 aaPredicted RBP7.06□□□□□ -1.28
NUP54-207ENST00000508583 RPP30P78346 268 aaKnown RBP7.06□□□□□ -1.28
NUP54-207ENST00000508583 ANKRD55Q3KP44 614 aa7.06□□□□□ -1.28
NUP54-207ENST00000508583 C9orf66Q5T8R8 295 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms